Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq18456 152 8e-33 seq3879 136 6e-28 seq6930 129 9e-26 >seq18456 Length=2697238 Score = 152 bits (168), Expect = 8e-33 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| |||| | || |||| |||||||| || ||||||||||| || || Sbjct 4257 CGCCAAGCGTCACCGCAAAGTCCTGAGAGACAACATCCAGGGCATCACCAAGCCCGCCAT 4198 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| ||||| || |||||||| |||| || | |||| || |||| Sbjct 4197 CCGCCGTCTCGCTCGGCGTGGGGGTGTCAAGCGGATCTCGGGCCTCATCTACGAGGAGAC 4138 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | || || ||| ||| |||| || || || ||| || || Sbjct 4137 GCGAGGGGTGCTGAAGGTGTTTCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 4078 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||| ||||||| | || || || |||| || || || Sbjct 4077 GCACGCCAAGCGCAAGACGGTCACCGCCATGGACGTGGTGTACGCCCTGAAGCGGCAGGG 4018 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 ||| | | ||||| || ||| |||| Sbjct 4017 CCGCACCCTGTATGGCTTCGGAGGTTA 3991 >seq3879 Length=1799445 Score = 136 bits (150), Expect = 6e-28 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| |||| | || |||| ||||| || || ||||||||||| || || Sbjct 7378 CGCCAAGCGTCACCGCAAAGTCCTGAGAGACAACATTCAGGGCATCACCAAGCCCGCCAT 7319 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || ||||| || || || |||||||| |||| || | |||| || |||| Sbjct 7318 CCGCCGCCTCGCTCGGCGCGGGGGTGTCAAGCGGATCTCGGGCCTCATCTACGAGGAGAC 7259 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 7258 GCGGGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 7199 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||| ||||||| | || || || |||| || || || Sbjct 7198 GCACGCCAAGCGCAAGACGGTCACCGCCATGGACGTGGTGTACGCCCTGAAGCGGCAGGG 7139 Query 16672 CCG 16674 ||| Sbjct 7138 CCG 7136 >seq6930 Length=243032 Score = 129 bits (142), Expect = 9e-26 Identities = 185/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 141940 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 141881 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 141880 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 141821 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| ||||||| ||| ||| |||| || || || ||| || || Sbjct 141820 GCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGA 141761 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 141760 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 141701 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | | || || || || Sbjct 141700 CCGCACGCTCTACGGCTTCGG 141680 Score = 129 bits (142), Expect = 9e-26 Identities = 185/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 202500 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 202441 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 202440 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 202381 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| ||||||| ||| ||| |||| || || || ||| || || Sbjct 202380 GCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGA 202321 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 202320 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 202261 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | | || || || || Sbjct 202260 CCGCACGCTCTACGGCTTCGG 202240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78982151890917