Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq18010 147 3e-30 seq9940 131 2e-25 seq10479 114 2e-20 seq7184 107 2e-18 seq2520 86.0 8e-12 >seq18010 Length=2831715 Score = 147 bits (162), Expect = 3e-30 Identities = 280/409 (68%), Gaps = 19/409 (5%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 ||||||| || || || || ||||||| |||||| ||||| | | | |||| |||||| Sbjct 1771383 AACATCAGGCAGGCAAAGTCTCAGTGCAAACCCTCTTCTCTGCCACTCAGTTGGTTGGAG 1771324 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || |||| || | || ||| | | || || ||||| ||||| | || Sbjct 1771323 AA--TGAGGCCAGTCACCAGGTCTCATTTCTTGAGCCAGAATATCGGCGC---------- 1771276 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC-- 33472 |||||||||||||||| ||||| ||| | | || | |||||||| |||| Sbjct 1771275 -AAAAGAAGATTCCTTCCACTGCCTTAAACCCTACAACACGTTCTCCATAGGCGGCCTCT 1771217 Query 33473 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTA-CACAAGGCATCGTTTC 33530 |||| ||||| ||||| | | || | || || ||||||||||||| || Sbjct 1771216 TTGTCCCTGATCCAACGCAAGGCCCAGCCAGGCTGCCTTCTTGGCACAAGGCATCGTCTC 1771157 Query 33531 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33590 | ||| || ||||| | | |||| | |||||||| | ||| || || | || Sbjct 1771156 CACGGCGTTGAAGAGCAACTCCCTTTCCTGGGCATCTTTAATGTCAGTGTCAATGAGGAG 1771097 Query 33591 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33650 ||| |||||||| ||||| |||||||| ||||| || || || | ||||||||| | ||| Sbjct 1771096 ACTGTACATTTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCTGTAGAAACAGC-AGC 1771038 Query 33651 C-TCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATT 33698 | ||||| ||||| |||||| | ||| || ||| |||| || || || Sbjct 1771037 CTTCGGTGATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTCTCCTT 1770989 >seq9940 Length=104459 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 69212 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 69153 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 69152 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 69093 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 69092 CTGTTTCTTATACCATA 69076 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 49823 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 49764 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 49763 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 49704 Query 63332 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 || |||| ||| || || | ||||||| || Sbjct 49703 AGGCTCCAGGTAAATAGCAAATGCTCCAGGTCG 49671 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 |||| |||| ||| |||||||| ||||| | || || || || || || || || |||| Sbjct 20955 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 20896 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 20895 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 20836 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 ||| || || || || ||| | |||| ||||| || || ||||| Sbjct 20835 GTTCCACAGTAGTGACCCCACTGTATAAACCTTGGATTACTTTCAT 20790 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 62577 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62636 || || || ||||| || | || || || || ||||| || || || || || || ||| Sbjct 55199 TAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 55140 Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 62696 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 55139 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 55080 Query 62697 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62756 | | |||||||| || || || | ||||| || ||||| || ||||| | ||| | Sbjct 55079 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATAGGGCGATGACGT 55020 Query 62757 TTATTAGA 62764 ||||| || Sbjct 55019 TTATTTGA 55012 >seq10479 Length=2664821 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||||||||| |||||||| || ||||| ||||| ||||| | Sbjct 1179479 CCTCATCTCTGCTAATAAGTTCGTTGGAGAACGTGAGGCCAGGCATCAGGCCTCGCTTCT 1179420 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || || || ||||| || || || ||||||||||| || ||||| || || | Sbjct 1179419 TGAGCCAGAAGATCGACGCGAAAGAGCCGGAGAAGAAGATTCCCTCCACTGCGGCGAACG 1179360 Query 33446 C 33446 | Sbjct 1179359 C 1179359 >seq7184 Length=5150663 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| |||||||| ||||| || || | || || Sbjct 2936603 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 2936544 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 | ||| ||||| | ||| ||||| || || ||||| ||||||||||| ||||||||||| Sbjct 2936543 AACCAGAATATAGCAGCAAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 2936485 >seq2520 Length=8653699 Score = 86.0 bits (94), Expect = 8e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 31086 ATCTAGAGATTGTACTTCTTCCAGTTCTGGAT-AATATATACGTTGATAGATTAGCTGAG 31144 ||||| | ||| ||||| || | |||||||| || | || |||| | | || ||||| | Sbjct 1838275 ATCTAAAACTTGAACTTCCTCTATTTCTGGATTAAAAAATCCGTTCACAAATGAGCTGTG 1838216 Query 31145 CTATTCTATCTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTC 31204 | |||| || ||| | ||||| | ||| | |||| ||| ||||| || | || | Sbjct 1838215 CAATTCGGTCACCATT-TTTACTTCAAAATTTTATTTGCCAAAATTAAATAGTACAACAC 1838157 Query 31205 CTATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT 31253 | | ||||| ||||||||||| ||||| ||||| |||||| ||| || Sbjct 1838156 CAAGATTTCCTCTATAATCTTCATCTATAACACCAGCTCCTACATCTAT 1838108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622154741080040