Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq13340 96.9 3e-15 >seq13340 Length=2707246 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 1287755 AATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 1287696 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 1287695 TGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCA 1287636 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || || Sbjct 1287635 GCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAA 1287576 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 1287575 CATCCAGAAAGAGTCCAC 1287558 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 1286842 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1286783 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 1286782 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1286723 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 1286722 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCTTGTCCGACTACAAC 1286663 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 1286662 ATCCAGAAAGAGTCCAC 1286646 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 1287070 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287011 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 1287010 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1286951 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 1286950 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1286891 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 1286890 ATCCAGAAAGAGTCCAC 1286874 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 1287298 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287239 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 1287238 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287179 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 1287178 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287119 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 1287118 ATCCAGAAAGAGTCCAC 1287102 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 1287526 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287467 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 1287466 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287407 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 1287406 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287347 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 1287346 ATCCAGAAAGAGTCCAC 1287330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429402746214195