Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq13340 109 4e-19 seq101769 95.1 1e-14 seq10844 95.1 1e-14 seq7603 89.7 4e-13 seq4008 89.7 4e-13 seq18775 86.0 5e-12 >seq13340 Length=2707246 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | ||| |||| ||||| |||||||| || || ||||||||||||| Sbjct 1287527 CCCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 1287586 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| |||| |||| || ||||| || | || |||||||| ||||| || Sbjct 1287587 CAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGG 1287646 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||||||||| || || || ||| || | | | ||||| | |||||| Sbjct 1287647 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACATTCTCGATGGTGTCACTGGGCTCG 1287704 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||| || ||||||| || || || || ||||||||| Sbjct 1287705 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATT 1287755 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | ||| |||| ||||| |||||||| || || ||||||||||||| Sbjct 1286843 CCCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 1286902 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| |||| |||| || ||||| || | || |||||||| ||||| || Sbjct 1286903 CAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGG 1286962 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||||||||| || || || ||| || | | | ||||| | |||||| Sbjct 1286963 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCG 1287020 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||||| || || || || |||||||| Sbjct 1287021 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1287070 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | ||| |||| ||||| |||||||| || || ||||||||||||| Sbjct 1287071 CCCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 1287130 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| |||| |||| || ||||| || | || |||||||| ||||| || Sbjct 1287131 CAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGG 1287190 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||||||||| || || || ||| || | | | ||||| | |||||| Sbjct 1287191 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCG 1287248 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||||| || || || || |||||||| Sbjct 1287249 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1287298 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | ||| |||| ||||| |||||||| || || ||||||||||||| Sbjct 1287299 CCCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 1287358 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| |||| |||| || ||||| || | || |||||||| ||||| || Sbjct 1287359 CAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGG 1287418 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||||||||| || || || ||| || | | | ||||| | |||||| Sbjct 1287419 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCG 1287476 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||||| || || || || |||||||| Sbjct 1287477 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1287526 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || ||||||||||||| || ||| |||| Sbjct 1286630 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCGTC 1286689 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| || | || |||||||| ||||| || | |||||||||||| Sbjct 1286690 TTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTC 1286749 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || ||| || | | | ||||| | |||||| || | ||||||| Sbjct 1286750 TTGGATCTTGGC--CTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 1286807 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||||| || || || || |||||||| Sbjct 1286808 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1286842 >seq101769 Length=1662402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || ||||||||||| | | || | | || Sbjct 33399 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 33458 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| ||||| ||| | ||| || || || Sbjct 33459 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATC 33518 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | || || | ||||||| |||| ||||||| Sbjct 33519 CTGGATCTTGGC--CTTCACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATG 33576 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| || || || || |||||||| Sbjct 33577 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 33611 >seq10844 Length=7385475 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || || |||||||| | | || | || Sbjct 3309422 CAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGACCATC 3309363 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 ||| | |||||||||||| |||| || ||||| ||||| || | |||||| ||||| Sbjct 3309362 CTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTC 3309303 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || ||| || || | | | ||||| | |||||| || | ||||||| Sbjct 3309302 TTGGATTTTAGCT--TTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 3309245 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || ||||| |||||||| Sbjct 3309244 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3309210 >seq7603 Length=6857920 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| ||||||| || || || |||||||| | | || | | || Sbjct 2062661 CAGCACCAAGTGCAGGATGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGTGACCATC 2062720 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 ||| | ||||||||||| |||| || ||||| ||||| || | |||||| ||||| Sbjct 2062721 CTCTAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTC 2062780 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || ||| || || | | | ||||| | |||||| || | ||||||| Sbjct 2062781 TTGGATTTTAGCT--TTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 2062838 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || ||||| |||||||| Sbjct 2062839 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2062873 >seq4008 Length=4289301 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| ||||||||||| | ||||||||||| | || ||| | |||| Sbjct 405277 CAGGACCAGGTGCAGAGTGGACTCCTTCTAGATGTTGTAGTCAGACAGGGTGTGCCCGTC 405218 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || |||| ||| | || ||||| || ||||| || | |||||||||||| Sbjct 405217 TTCCAGCTGCTTGCTCGCGAAGATCAGCCGTTGCTGGTCATGGGGGATGCCCTCTTTGTC 405158 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || ||| || | | | ||||| | |||||| |||| ||||||| Sbjct 405157 TTGGATCTTGGC--CTTGACATTCTCGAGGGTGTCACTGGGCTCGACCTCCAGGGTGATG 405100 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || | ||||| || || | || |||||||| Sbjct 405099 GCCTTGCTGGTCAAGGTCTTCATGAAGATCTGCAT 405065 >seq18775 Length=3279689 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| |||||||| | || || |||||||| | | || | | ||||| | ||| Sbjct 1065715 TGCAGGGTGGACTCTTCCTGAATATTGTAGTCTGAGAGAGTGTGACCATCCTCTAGCTGT 1065656 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||||||| |||| || ||||| ||||| || | |||||| ||||| || || Sbjct 1065655 TTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTA 1065596 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | ||||| | |||||| || | ||||||||| || || | Sbjct 1065595 GCT--TTGACATTCTCATTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAG 1065538 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || ||||| |||||||| Sbjct 1065537 TCAGGGTCTTCACAAAGATCTGCAT 1065513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404585565429310