Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq15063 140 2e-28 seq6421 127 1e-24 seq1888 109 4e-19 seq13748 107 1e-18 seq4981 105 4e-18 seq18467 104 2e-17 seq2680 102 5e-17 seq15376 100 2e-16 seq10844 89.7 3e-13 seq101769 86.0 4e-12 seq10317 84.2 1e-11 >seq15063 Length=4376 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1196 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1255 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1256 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1290 Score = 100 bits (110), Expect = 2e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | ||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 3328 CTCTCTTTCCAAAGAACTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 3387 Query 20007 GGTAATATTTAGCCTTAT 20024 | |||| ||||| |||| Sbjct 3388 GCCAATAATTAGCTTTAT 3405 >seq6421 Length=2546037 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 1564917 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 1564976 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1564977 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1565011 >seq1888 Length=677400 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||| |||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct 658121 AAGCCCGTGCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGC 658062 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||||||||| ||||||||| || Sbjct 658061 TCATCCATTCATGCGCGTCACTCATTAGATGAAGA 658027 >seq13748 Length=5565241 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 1469683 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 1469742 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1469743 GCCGGTATTTAGCCTTA 1469759 >seq4981 Length=3855507 Score = 105 bits (116), Expect = 4e-18 Identities = 79/93 (85%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| |||||||||||||||||||| || |||||||| ||||| || |||||||| Sbjct 3365656 AAGCCGGTTCCCTTGGCTGTGGTTTCACTGGATAGTAGGTAGGGGCAGTGGGAATCTCGT 3365597 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | |||| ||||||||| ||||||| |||||||| Sbjct 3365596 TCATCCATTCATGCGCATCACTAACTAGATGAC 3365564 >seq18467 Length=3096793 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||| ||||| || ||||| || Sbjct 108364 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTTGT 108423 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| || |||||||||||||||| Sbjct 108424 TCATCCATTCATGCATGTTACTAATTAGATGACGA 108458 >seq2680 Length=6251 Score = 102 bits (112), Expect = 5e-17 Identities = 82/99 (83%), Gaps = 9/99 (9%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT----AGATAGGG-----GGTAATC 25952 |||||||||||||||||||||||| |||| |||||| || ||||| || |||| Sbjct 6047 AAGCCCGTTCCCTTGGCTGTGGTTCCGCTGGATAGTCAGTAGGTAGGGACAGTGGGAATC 5988 Query 25953 TCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||| ||| |||||||||||| ||||||||||||||| Sbjct 5987 TCGTTCCTCCATTCATGCGCGTCGCTAATTAGATGACGA 5949 >seq15376 Length=770734 Score = 100 bits (110), Expect = 2e-16 Identities = 79/95 (83%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||| || ||||| || |||||||| Sbjct 751268 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGGAGGTAGGGACAGTGGGAATCTCGT 751209 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||| | ||| ||||||||||| || Sbjct 751208 TCATCCACTCATGCACATCAATAATTAGATGAGGA 751174 >seq10844 Length=7385475 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| || | ||||| |||||| || || ||| ||| || ||||||||||| || || Sbjct 3309436 CCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAG 3309377 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || |||| ||||| || ||||| || || || || || || | ||| Sbjct 3309376 AGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 3309317 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || ||||| ||||| || ||||||| | || || | ||||| Sbjct 3309316 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACC 3309257 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || |||| ||| ||||| || |||||||| Sbjct 3309256 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3309210 >seq101769 Length=1662402 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| |||| ||| | |||| || || ||| ||| || || || ||||||||||| Sbjct 33157 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 33216 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || || || ||||| || || | || || |||| ||| Sbjct 33217 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 33276 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| || ||| || || ||||||||||| | ||||| | || || Sbjct 33277 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCCACC 33336 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || |||| ||| |||||||| |||||||| Sbjct 33337 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 33383 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| |||| |||| |||| || || ||| ||| || || || ||||| |||| Sbjct 33383 TACCACCCCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 33442 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | || || || ||||| || || | || || |||| | Sbjct 33443 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAG 33502 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||| || ||| || || ||||||||||| | ||||| | || | Sbjct 33503 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCCA 33562 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || |||| ||| |||||||| |||||||| Sbjct 33563 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 33611 >seq10317 Length=1945714 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||| ||| |||||||||||| ||||| ||||||||| || | || Sbjct 477360 CAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACTCCCATC 477419 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| | || Sbjct 477420 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTAATC 477479 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA--ACTTCTAATGTAATA 38282 | || || ||| ||||| | | ||||| |||| || | | || || Sbjct 477480 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAGACCTTGAGAGTGATG 477539 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || ||||| | ||||||||| || |||||||| || Sbjct 477540 GTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 477577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334531761743039