Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq10844 127 2e-24 seq7603 114 1e-20 seq18775 109 5e-19 seq19127 95.1 1e-14 seq9191 95.1 1e-14 seq4238 95.1 1e-14 >seq10844 Length=7385475 Score = 127 bits (140), Expect = 2e-24 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 3309210 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 3309269 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| || ||||| || || || ||||||||| Sbjct 3309270 GACACCATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 3309326 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||| |||||||| |||| |||| ||||||| | || ||| Sbjct 3309327 CAGCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCGCACTCTCTCAGACTAC 3309386 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| ||||| || || || ||||| Sbjct 3309387 AATATTCAGAAAGAGTCCACCCTGCACTTGGTGCT 3309421 >seq7603 Length=6857920 Score = 114 bits (126), Expect = 1e-20 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 2062873 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 2062814 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| || ||||| || || || ||||||||| Sbjct 2062813 GACACCATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 2062757 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | ||||| || |||||||| |||| |||| || |||| | || ||| Sbjct 2062756 CAGCAGCGTCTGATTTTGGCGGGCAAACAGCTAGAGGATGGTCACACTCTCTCAGACTAC 2062697 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| |||| || || || ||||| Sbjct 2062696 AATATTCAGAAAGAGTCCATCCTGCACTTGGTGCT 2062662 >seq18775 Length=3279689 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 1065513 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 1065572 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| | ||| | || |||| |||| || ||||| || || || ||||||||| Sbjct 1065573 GACACCAATGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 1065629 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||| |||||||| |||| |||| || |||| | || ||| Sbjct 1065630 CAGCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCACACTCTCTCAGACTAC 1065689 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| |||| ||||| || || || |||| Sbjct 1065690 AATATTCAGGAAGAGTCCACCCTGCACTTGATGCT 1065724 >seq19127 Length=6355749 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || |||||||| | || | ||| | | Sbjct 2861533 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGTCCATCACCCTTGAGATTGAGCCCAGT 2861592 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| || ||||| || || || ||||||||| Sbjct 2861593 GACACCATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 2861649 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||| | |||||| | |||||||| |||| ||| | ||| | || || Sbjct 2861650 CAGCAGCATCTGATTTTTACGGGCAAACAGCTAGAGGATAGCCATACTCTCTCAGACTAA 2861709 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||| ||||| ||||| || || || || Sbjct 2861710 AATATTCAGAAAGAGTCCACCCTGCACTTGGT 2861741 >seq9191 Length=3706871 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| |||| || || | | Sbjct 2451252 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCGGT 2451311 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| | ||| | || |||| |||| || ||| || || || || || ||| Sbjct 2451312 GACACCACTGAG--AGTGTCAAAGCTAAAATCCAA-GACCGGGAGGGCATCCCGCCCGAC 2451368 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | ||||||||||||||||| | || ||| |||||| | || ||| Sbjct 2451369 CAGCAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGAATGGCCGCACTCTCTCAGACTAC 2451428 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGC 25209 |||||||| ||||| ||||| || || || |||| Sbjct 2451429 AATATTCAGAAAGAGTCCACCCTGCACTTGGTGC 2451462 >seq4238 Length=125141 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/202 (71%), Gaps = 5/202 (2%) Strand=Plus/Minus Query 24997 CAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGT 25056 ||||||| || ||||| ||||||||||| ||||| ||||||| |||| |||||| | Sbjct 114677 CAATGCAGATCTTTGTGAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTGGAGCCCA 114618 Query 25057 CTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| |||||| | ||| || ||| || ||||| | || || ||||||| Sbjct 114617 GTGACACCATCGAGAATGTCAAGGTCAAGATCCAAGA-AAAGA--GCATCCCCCCTGACC 114561 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | || ||||| ||||||| | |||||| |||| | | | |||| Sbjct 114560 AGCAGAGGCTGATCTTTGCTGGCAAACGTCTGAAAGATG--GGCACCTTATCCAACTACA 114503 Query 25177 ATATTCAAAAAGAATCCACGCT 25198 |||| || | ||| ||||| || Sbjct 114502 ATATCCAGATAGAGTCCACTCT 114481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432790539083735