Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq18010 96.9 4e-15 >seq18010 Length=2831715 Score = 96.9 bits (106), Expect = 4e-15 Identities = 273/415 (66%), Gaps = 22/415 (5%) Strand=Plus/Minus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATA-TCAACTCATTG 93139 || |||| | ||| |||||||| || ||||| || |||| || | ||| | ||| Sbjct 1771385 TGAACATCAGGCAGGCAAAGTCTCAGTGCAAACCCTCTTCTC-TGCCACTCAGTTGGTTG 1771327 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||||| | || | | ||| ||| |||||||||||| ||||| | |||||| Sbjct 1771326 GAGAATG--AGGCCAGTCACCAGGTCTCATTTCTTGAGCCAGAATATCGGCGCAAAAG-- 1771271 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 || || |||||||| || ||| | |||| |||||| || | ||| Sbjct 1771270 ---------AAGATTCCTTCCACTGCCTTAAACCCTACAACACGTTCTCCATAG---GCG 1771223 Query 93260 GAATTACTG---CTGATCCATTTTAAAGCCCAATC-GGCTTTTTTCTTAATACAAGGTAG 93315 | | || |||||||| || ||||| | |||| ||||| |||||| | Sbjct 1771222 GCCTCTTTGTCCCTGATCCAACGCAAGGCCCAGCCAGGCTGCCTTCTTGGCACAAGGCAT 1771163 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 || || | ||||| || || | || | || | | |||| |||| || || || Sbjct 1771162 CGTCTCCACGGCGTTGAAGAGCAACTCCCTTTCCTGGGCATCTTTAATGTCAGTGTCAAT 1771103 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 | ||| |||||||||||||||| || ||||| ||||||||||| | ||||||||| Sbjct 1771102 GAGGAGACTGTACATTTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCTGTAGAAACA 1771043 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTG 93490 | |||| |||||||| |||||||| ||| | ||| || | || || ||| Sbjct 1771042 GCAGCCTTCGGTGATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTCTCCTTG 1770988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556152410415560