Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq101769 95.1 1e-14 seq10317 89.7 4e-13 seq5337 89.7 4e-13 >seq101769 Length=1662402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || || || || Sbjct 33187 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 33246 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| ||||| |||||||| || || ||||| || Sbjct 33247 GCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 33306 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| || ||| || || |||| ||| | || ||||||||||| || Sbjct 33307 ACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 33366 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 33367 TTCACGAAGATCTGCAT 33383 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| || | ||| || |||||| || || || || Sbjct 33415 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 33474 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| ||||| |||||||| || || ||||| || Sbjct 33475 GCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 33534 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| || ||| || || |||| ||| | || ||||||||||| || Sbjct 33535 ACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 33594 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 33595 TTCACGAAGATCTGCAT 33611 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || || || || Sbjct 33643 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 33702 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| || || |||||||| || || ||||| || Sbjct 33703 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTA 33762 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 33763 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 33822 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 33823 TTCACGAAGATTTGCAT 33839 >seq10317 Length=1945714 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || | ||| | ||| || || |||||||||||||| || || ||||| Sbjct 477357 TCTCAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACTCCC 477416 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| ||||| || ||||| |||| || | || || || |||||||| ||||| | Sbjct 477417 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTA 477476 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC--GACGTCCACGGTC 114344 || ||||| |||| | ||| | || || | || ||| ||| | | || Sbjct 477477 ATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAGACCTTGAGAGTG 477536 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || || || ||||| |||||||||||||| Sbjct 477537 ATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCAT 477574 >seq5337 Length=12391395 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 || ||| ||||| |||||||| || | ||| | || ||||| ||||||||||||| || Sbjct 8351690 AACACCACCACGAAGTCTCAACACAAGATGAAGAGTGGATTCCGTTTGAATGTTGTAGTC 8351749 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 || |||||| |||||| ||||| || ||||| |||| || | | || || || Sbjct 8351750 AGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG--TCCGCTGATCAGG 8351807 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 |||||| ||||| || || ||||| ||| | ||| | || || | || ||| Sbjct 8351808 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTCCGTTTTCTATCGTATCTGAGGGTTC 8351867 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| | | || || || || || ||||| || ||||||||| Sbjct 8351868 AACCTCCAGAGGGATGGTCTTCCCTGTGAGGGTTTTCACGTTAATCTGCAT 8351918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419613303233628