Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10479 105 1e-17 seq7184 93.3 8e-14 >seq10479 Length=2664821 Score = 105 bits (116), Expect = 1e-17 Identities = 101/127 (80%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| || || |||| || ||||| ||||||||||| ||| | ||||| || ||||||| Sbjct 1179354 TGGTGGCGTTCGCCGCAGTGGAGGGAATCTTCTTCTCCGGCTCTTTCGCGTCGATCTTCT 1179413 Query 42766 GGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||||||| || ||| | |||||| || ||||| ||||| |||||||| || ||||| Sbjct 1179414 GGCTCAAGAAGCGAGGCCT-GATGCCTGGCCTCACGTTCTCCAACGAACTTATTAGCAGA 1179472 Query 42825 GACGAGG 42831 || |||| Sbjct 1179473 GATGAGG 1179479 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 ||| |||||||| |||||||||||||| ||||||| ||||| ||||| ||||||||||| Sbjct 1180933 CCCATTCGACTTCATGGAGAACATCTCACTGGAGGGGAAGACGAACTTCTTCGAGAAGCG 1180992 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 1180993 GGTGGGCGAGTACCAG 1181008 >seq7184 Length=5150663 Score = 93.3 bits (102), Expect = 8e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || || |||||||| ||| | || || Sbjct 2936470 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGCTCATTTGCT 2936529 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||| | ||| | | |||| | |||||| ||||||||||| || || ||||| Sbjct 2936530 GCTATATTCTGGTTAAAGAAAAGAGGTCT-GATGCCTGGACTCACCTTTTCCAATGAACT 2936588 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 2936589 CATCAGCAGAGATGA 2936603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943137894299440