Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq13340 96.9 3e-15 >seq13340 Length=2707246 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 || ||| ||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || Sbjct 1286612 GACACCCCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTC 1286671 Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCAC 34016 | ||| ||| |||| |||| ||||||||||| || ||||| |||||||| || Sbjct 1286672 GGACAAGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGG 1286731 Query 34017 CGGCACGCTCTCTTTGTC 34034 || | || ||||||||| Sbjct 1286732 GGGGATGCCCTCTTTGTC 1286749 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 1286844 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1286903 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 1286904 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1286963 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 1286964 ATGCCCTCTTTGTC 1286977 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 1287072 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287131 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 1287132 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287191 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 1287192 ATGCCCTCTTTGTC 1287205 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 1287300 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287359 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 1287360 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287419 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 1287420 ATGCCCTCTTTGTC 1287433 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 1287528 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287587 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 1287588 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287647 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 1287648 ATGCCCTCTTTGTC 1287661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396569919658738