Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3796 84.2 2e-11 seq10317 82.4 5e-11 >seq3796 Length=456941 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/219 (69%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 14961 TCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGC 15020 ||| || || | ||||| || || |||||||| |||||||| || || | || | Sbjct 356753 TCTCAACACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAAAGA-ACGTC---C 356698 Query 15021 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTT 15080 |||||| | ||| |||||||| | |||| | || || | ||||||||||||| Sbjct 356697 GTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGACCAGGAGGAATTCCTTCCTC 356638 Query 15081 GTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140 || | | || | | ||||| ||||| | ||| | ||| || || || ||||| Sbjct 356637 ATC-CTAGTTCTTGGTCTTACATTTTCTGTTGTAGCCAAGGGTTCAACCTCGAAAGTAAT 356579 Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||| ||||| || || |||| |||||||| |||||||| Sbjct 356578 GGTCTTACCCGTTAGGATTTTCACAAAAATCTGCATATT 356540 >seq10317 Length=1945714 Score = 82.4 bits (90), Expect = 5e-11 Identities = 152/222 (68%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 14960 ATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG 15019 |||| || || | |||||| || || || ||||| |||||||| || | | | ||| Sbjct 477356 ATCTCAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACTCC 477415 Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 | ||||| | ||| |||||||| | |||| | || || || ||||||||||||| Sbjct 477416 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCT 477475 Query 15080 TGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC--TACGTCTAAGGT 15137 || || ||| |||||| ||||||| ||||| ||| || | | || Sbjct 477476 AATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAGACCTTGAGAGT 477535 Query 15138 AATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| || || || || ||||| |||||||| ||||| || Sbjct 477536 GATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 477577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356948723240165