Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq10844 122 8e-23 seq7603 113 4e-20 seq12718 109 5e-19 seq18775 100 3e-16 seq9191 91.5 1e-13 seq101769 86.0 6e-12 seq10317 82.4 7e-11 >seq10844 Length=7385475 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || |||||||| ||||||||||| || | |||||| | Sbjct 3309424 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGACCA 3309365 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| || || | |||| |||||||| || || || |||||||||||| Sbjct 3309364 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 3309305 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || |||||| |||| | || | |||||| | ||| || || | ||| | Sbjct 3309304 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 3309245 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || ||||| |||||||| Sbjct 3309244 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3309210 >seq7603 Length=6857920 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | | |||||||| ||||||||||| || | ||| || | Sbjct 2062659 CGCAGCACCAAGTGCAGGATGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGTGACCA 2062718 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| || || | |||| |||||||| || || || |||||||||||| Sbjct 2062719 TCCTCTAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 2062778 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || |||||| |||| | || | |||||| | ||| || || | ||| | Sbjct 2062779 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 2062838 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || ||||| |||||||| Sbjct 2062839 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2062873 >seq12718 Length=1038120 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || |||||||| | ||||||||| || | |||||| | Sbjct 56369 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTAAATATTGTAGTCTGAGAGAGTGCGACCA 56310 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| || || | |||| |||||||| | || || ||||| |||||| Sbjct 56309 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTTAGGTGGGATGCCGTCCTTG 56250 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || |||||| |||| | || | |||||| | ||| || || | ||| | Sbjct 56249 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 56190 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || ||||| |||||||| Sbjct 56189 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 56155 >seq18775 Length=3279689 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 || ||| || | || ||||||| ||||||||||| || | ||| || ||| || Sbjct 1065722 CATCAAGTGCAGGGTGGACTCTTCCTGAATATTGTAGTCTGAGAGAGTGTGACCATCCTC 1065663 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||||||| || || | |||| |||||||| || || || |||||||||||||| Sbjct 1065662 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 1065603 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| |||| | || |||||| | ||| || || | ||| | || || Sbjct 1065602 GATTTTAGCTTTGACATTCTCATTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 1065543 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| || || ||||| |||||||| Sbjct 1065542 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 1065513 >seq9191 Length=3706871 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || |||||||| ||||||||||| || | ||||| || || Sbjct 2451461 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGGCCATTCTC 2451402 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||||| || || | |||| |||||||| ||||| || ||||||||| ||| Sbjct 2451401 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCCGGTCTTG 2451342 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| |||| || |||||| ||||| |||| ||| | || || Sbjct 2451341 GATTTTAGCTTTGACACTCTCAGTGGTGTCACCGGGTTCGACCTCGAGGGTGATGGTCTT 2451282 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| || || ||||| |||||||| Sbjct 2451281 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 2451252 >seq101769 Length=1662402 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || ||||| || || Sbjct 33187 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 33246 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| |||||||| ||||| ||||| ||| ||| || ||| Sbjct 33247 GCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 33306 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| || | ||| || || | ||| | || ||||||||||| || Sbjct 33307 ACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 33366 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 33367 TTCACGAAGATCTGCAT 33383 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | || |||||||| || || ||||| || | ||||| | Sbjct 33397 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 33456 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | | |||||| |||||||| ||||| ||||| Sbjct 33457 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTA 33516 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | || | ||| || | ||| || || | ||| | Sbjct 33517 TCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATG 33576 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || || || || |||||||| Sbjct 33577 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 33611 >seq10317 Length=1945714 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/219 (68%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 126897 ATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAG 126956 ||| |||||| | ||| | ||| ||||| |||||||| ||||| || || || | Sbjct 477356 ATCTCAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACTCC 477415 Query 126957 AATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCT 127016 ||| || || || || ||||| |||||| || |||||||| ||||| || || |||| Sbjct 477416 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCT 477475 Query 127017 TGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTC--GACTTCGACGGT 127074 ||| ||| || ||| | | ||| | || |||| || ||| | || || Sbjct 477476 AATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAGACCTTGAGAGT 477535 Query 127075 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || || || || ||||| |||||||||||||| Sbjct 477536 GATGGTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCAT 477574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474895909488560