Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq2520 84.2 6e-12 >seq2520 Length=8653699 Score = 84.2 bits (92), Expect = 6e-12 Identities = 182/267 (68%), Gaps = 13/267 (5%) Strand=Plus/Plus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017 |||| | ||| || |||| ||| |||||| | ||| | || || || || | | Sbjct 1838050 TTCCTTCTGGGTGCTATGA-AGAGGAGCTCCACGTTCCAGCTTGGCTGCAAAACACTTTA 1838108 Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077 | ||||| || ||||||||||| ||| ||| | ||| || || |||||||||| ||| Sbjct 1838109 TAGATGTAGGAGCTGGTGTTATAGATGAAGATTATAGAGGAAATCTTGGTGTTGTACTAT 1838168 Query 1078 TTAATTTTAGCGATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTT 1137 |||||||| || | | |||| | | | || ||||| | ||||| ||| | |||| Sbjct 1838169 TTAATTTTGGCAAATAAAATTTTGA-AGTAAAAATGGTGACCGAATTGCACAGCTCATTT 1838227 Query 1138 GTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGATTCGG 1191 ||||| | ||||| ||||| |||||| ||| ||| ||||| || | | Sbjct 1838228 GTGAACGG---ATTTTTTAATCCA--GAAATAGAGGAAGTTCAAGTTTTAGATGACACTG 1838282 Query 1192 AAAGGGGTTCTGCAGGATTTGGGTCTA 1218 ||||||| || | || ||||| |||| Sbjct 1838283 AAAGGGGCTCAGGGGGTTTTGGTTCTA 1838309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138514002332964