Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq10844 102 6e-17 seq7603 89.7 4e-13 >seq10844 Length=7385475 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| |||||| || || ||| |||||| ||||||||||| || || Sbjct 3309437 GCCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 3309378 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | ||| | || || | ||| || || ||||| ||||| ||||| || || | || Sbjct 3309377 GAGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 3309318 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| || || ||| ||| | | | || | ||| || Sbjct 3309317 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAAC 3309258 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || || || |||| || || ||||| ||||||||| Sbjct 3309257 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATC 3309209 >seq7603 Length=6857920 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| |||||| || || || |||||| ||||||||||| || || Sbjct 2062646 GCCACCCCTGAGACGCAGCACCAAGTGCAGGATGGACTCTTTCTGAATATTGTAGTCTGA 2062705 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | ||| || || || || ||||| ||||| || || | || Sbjct 2062706 GAGAGTGTGACCATCCTCTAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGTGG 2062765 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| || || ||| ||| | | | || | ||| || Sbjct 2062766 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAAC 2062825 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || || || |||| || || ||||| ||||||||| Sbjct 2062826 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATC 2062874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380465119404387