Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq12867 109 1e-18 seq10479 107 4e-18 seq13089 87.8 3e-12 seq16561 86.0 1e-11 >seq12867 Length=598317 Score = 109 bits (120), Expect = 1e-18 Identities = 125/166 (75%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 241385 AGCTGCTGACAGCCTTGGC--ACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCT 241442 ||| |||| ||||| | || ||||| | || ||||| ||||||||| |||||||||| Sbjct 278633 AGCAGCTGGCAGCCGTTGCTGACATGGGTCAT--GACCTTCTGTTTGAGCTGGGCCACCT 278576 Query 241443 GGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCA 241502 | ||||| || ||| || || || || || || ||| || | ||||||| ||||| Sbjct 278575 GCTCCCGGAGGACGCCGGCAGTGTTCGAGAGCCCCAGGTTCTCGGCCTTGAGCGTCTTCA 278516 Query 241503 CTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 | || |||||||| ||||||||||| ||||| || ||| ||||| Sbjct 278515 CCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCA 278470 >seq10479 Length=2664821 Score = 107 bits (118), Expect = 4e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || | ||| || || |||||||||| ||| |||||||| | || | || ||| Sbjct 1179477 TCATCTCTGCTAATAAGTTCGTTGGAGAACGTGAGGCCAGGCATCAGGCCTCGCTTCTTG 1179418 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || | |||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 1179417 AGCCAGAAGATCGACGCGAAAGAGCCGGAGAAGAAGATTCCCTCCACTGCGGCGAACGC 1179359 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||||||||||| ||||||||||| Sbjct 1181008 CTGGTACTCGCCCACCCGCTTCTCGAAGAAGTTCGTCTTCCCCTCCAGTGAGATGTTCTC 1180949 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||| ||||| Sbjct 1180948 CATGAAGTCGAATGGGTT 1180931 >seq13089 Length=8901769 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| || || | ||||| || | ||||| |||| ||| Sbjct 6508932 TTCACTTTTTCCTCCAGCCGGGCAATTCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 6508991 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| |||||||||| Sbjct 6508992 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 6509051 Query 241619 ATCGGAGA 241626 || || || Sbjct 6509052 ATGGGGGA 6509059 >seq16561 Length=5702027 Score = 86.0 bits (94), Expect = 1e-11 Identities = 246/371 (66%), Gaps = 12/371 (3%) Strand=Plus/Plus Query 38802 AGGAACATAACCAGGTCAGGCTTGGGTAGACCCACATCTGGTCCCATGCACCACT-CCAC 38860 || |||| ||||||||||| ||||| || | ||| ||||| | ||||||| | | | Sbjct 2088361 AGAAACACGACCAGGTCAGGTTTGGGAAGGCTCACGTCTGGCTGCTTGCACCAATGCAAA 2088420 Query 38861 GGGCATGTCAGGTTTCGCGCTGCTGAATGCCACACCGGAGAATGCGTACCTGTCCAACAC 38920 | | | ||| || || || | || || ||||| || || || | ||||||| | Sbjct 2088421 GAGAAGGTC-TCCTTGGCATTGGTAAAGGCAACACCAGAAAACGCCTGTCTGTCCACGAT 2088479 Query 38921 CAGGCTCGTCCCCCGTTCCAGCTTCTGCTTCATCAGGGGCACCAGCTCCCACCTGTTGGC 38980 ||| | | ||| | |||| | | ||| |||| ||||| | ||||| | ||| || Sbjct 2088480 GAGGGTGATGCCCTGGCTCAGCCTTTCCTTAATCAATGGCACTTGTTCCCAGCGGTTTGC 2088539 Query 38981 GGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGTCTTACTCTCCAGGTACGAGCT 39040 ||||| ||||| |||| ||| || |||| ||| |||| | |||| || || || Sbjct 2088540 AGAGAA---AAGGTGCACTGAGTGATCCTCCACCTCACTCTTCTTTTCCAAATAAGAACT 2088596 Query 39041 GATCATCTTTCCGATGGTAGTGGTTCTGTCGGGGAACCTCATCAGCTCGGCCGG-TCTCC 39099 | | || || || ||| | ||| || ||||| | | ||||||||| || | || Sbjct 2088597 CAGAAGTTTGCCAATTTCAGTTGATCTTTCCGGGAAGCGTAGCAGCTCGGCAGGATGGCC 2088656 Query 39100 CGCTACCTTGCAGA--GCCTCCACCAGCTTTTGACACTGTGTGGTCTTTCCAGCCCTGTC 39157 || | ||||| || |||||| ||| | ||| ||| || |||| | || | | Sbjct 2088657 GGCGGC---GCAGAGCGCGGCCACCAACTTGCAGCTCTGCGTGCTC-TTCCTGGCCGGCC 2088712 Query 39158 CACTCCTTCCA 39168 ||| ||||||| Sbjct 2088713 CACGCCTTCCA 2088723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930347785480960