Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq13404 316 2e-81 seq1135 167 3e-36 seq101758 109 6e-19 >seq13404 Length=4903880 Score = 316 bits (350), Expect = 2e-81 Identities = 664/990 (67%), Gaps = 16/990 (2%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 |||||| || |||| ||| |||| ||| || | ||||| ||| ||| || ||||| || Sbjct 41281 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCCATGTCAAACTTATTGGC 41222 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| || | || ||||||| || ||| || | ||| || || || || Sbjct 41221 AAACAAGTGGTGC---TTGCGCAGTATCCAGTTCAAGTCACCTGCCCCAAAAACACACAC 41165 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 ||| || | |||||| |||||||| || || || | || || || ||||||||||| Sbjct 41164 GGAGCGCACGTGCACCCCGTTGCAGGGTGGATAGGGTGCGCCCTTGTAAACGTCACCTTC 41105 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||||||||| || |||||||| || || || ||||| ||||| ||||||| || | Sbjct 41104 AAAGTACTGCCATTTGACAAACCTAGCAATTGCTTGCATATCGGACATGTCGTACTTATG 41045 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | | || || || | || || | ||| | |||||||| || | || Sbjct 41044 ACTTAAGGACAGTGAGCCAGGGACTTCAGGGATCCTCTGAATAGTGGCCCAGAGATACTC 40985 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 ||| || ||||| ||||| || | ||| ||||| |||| |||| | | || Sbjct 40984 GTCCGGACTGTATGTGTCTTTTGCCCACTCCATAAACTTCTGGATTTTTTCATTCTCTAG 40925 Query 160412 AACGTGAGT------AACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATAT 160465 |||| | | || || || || |||||||| || || | Sbjct 40924 CACGT-ACTCTNNNNNNNNNNNNNNNNNNNGACCACGAAATAAGCGCTGCCCGAAAACAG 40866 Query 160466 CGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCAC 160525 || | | ||| || ||||||| || || || | || | ||| | ||| Sbjct 40865 AGGCGTTTCAAGAGGAGGTTGCACTTTGTCAGTCCCCGTATTTGTCAGCTTTCCATCCAC 40806 Query 160526 CAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAG 160585 || | | |||| |||||||| | | || || | |||||| | ||||||||||| Sbjct 40805 CACTACATAGTGCTTTTTCCACCTTTCTTTTTTATGGGATGGCATTCTCTCCGTCTCTAG 40746 Query 160586 ACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGG 160645 |||| | || || || || |||| | |||| || || ||||| || || | || Sbjct 40745 GTTGTTTTCTCCCATTAGTGACTTGAGCTTCCTGACAATTTCCAGGTTGGTTTTAATAGG 40686 Query 160646 AAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTC 160705 ||| || | ||||| | ||| |||| ||||||||| ||| | | ||| ||||| Sbjct 40685 AAAATCCATGCCGCAAAGGTTGATCAGGTACTTCCAGCCTGCGTTTCTTTTGTGGAGGTC 40626 Query 160706 CCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAG 160765 || ||| || || | || ||||| || || ||||| || |||||||| || |||| || Sbjct 40625 CCGCATACAGTTGAGGTCGGCCTGGACCCGACTCCACGATGCGTACACCACAGTCTCCAG 40566 Query 160766 TTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAA 160822 | ||||||||||||||||||| |||||| || | || || |||| | ||||| || Sbjct 40565 CTGACTGGCCACAAAGACGTTACTGAAACAGGATGCAATACCAGTCACCGCGGCCAGGAA 40506 Query 160823 GAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 | | ||| |||| || |||||| || | ||||| | ||||||||| |||||| Sbjct 40505 GGA-ATC--CTCCGATTTCTTGTCCACATGAATACAATAGAAATTCTGAGGCATGTAGAT 40449 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 |||||| || | ||| || ||||| || || || ||||| | ||| || ||||| ||||| Sbjct 40448 GGCCCTCAGGAGCCTGTCAAACATTTCAATTTTGTGATGAACCACTATGGAGTATGCTAT 40389 Query 160943 CGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAA 161002 |||||||| | ||| || | || || | | | ||| || || ||||||| || Sbjct 40388 TGGAAACTCTGCCTCTTCTCTGCTAAGAGGTTCTACAATGTATTTGCGTCTCTTGATGAA 40329 Query 161003 ATAATCACAATCCCGCGTCATGTTGATATA 161032 | || ||||| | |||||||| ||||| Sbjct 40328 AGAAGTGCAATCGCTAGTCATGTTTATATA 40299 >seq1135 Length=2402129 Score = 167 bits (184), Expect = 3e-36 Identities = 227/317 (72%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212 || || | ||| | | |||| || ||||| || || ||||| || |||||||| ||| || Sbjct 126654 AGGGTGAGGCAGGCTATTCCTGACATCTTCCCGGAACCGAAGGTATTGAAGAGACACTTG 126595 Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272 | || ||||| || |||| ||||||||||| || || | |||| ||| | || ||| Sbjct 126594 TAACACCCTTCATCATCCAGAGTGGTATTCCAGAAGGTGATGGTTGTGTTCTGAAGTCCC 126535 Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332 |||| |||||||||| ||| ||||| | ||||| || || || || || | || | Sbjct 126534 AACTCAGTTATGTTCATCTTATCCTTATAGGCGGGTTGGACCACGACCCCATGCTCCTTG 126475 Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392 ||||| ||| ||||||| || ||||| | ||||| || |||||||| || || |||| Sbjct 126474 CTGAAAGTGACCATGTTTTCTGGGCTTGAAGCCTTCATTTTCTGCCATGTCACAATCACG 126415 Query 168393 ACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGC 168452 || || | || | |||| | |||| | ||||| || |||||||| | |||| Sbjct 126414 ACTTCCTGGGGAGTTTCCAGGAAGCATCGTAAAGAAGCAGGTGTGTTCAGTGGCTCTCTT 126355 Query 168453 TCATCTTGAGTTACGAC 168469 |||||| | || || || Sbjct 126354 TCATCTCGGGTCACCAC 126338 >seq101758 Length=7847725 Score = 109 bits (120), Expect = 6e-19 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| ||| |||| |||| ||| |||| ||||| | ||||| || |||| || || | Sbjct 2097385 AGATACTTTGCTAGATCACTTGGAGAGTTGTAATCTTCCACATGAATGAATGAGTCTGCT 2097444 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 |||||||| |||||||| |||| || || || || | || || ||||||| | || Sbjct 2097445 GGAATGTAATTTTCATAGTTTTCCCTAGATGGCCCCAGGACAATAGGTACGGAGCCAGCC 2097504 Query 176352 AATAATGAGCG--GTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAG 176409 | | |||| ||||| |||||||| |||||| || |||| ||||||||||| || | Sbjct 2097505 AGAA--GAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCGAAGG 2097562 Query 176410 CTAAATAGAACTTACA 176425 | || || ||||| Sbjct 2097563 AAAGGTAAAATTTACA 2097578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576484912240440