Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq10317 100 5e-16 seq18141 96.9 6e-15 >seq10317 Length=1945714 Score = 100 bits (110), Expect = 5e-16 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || || ||| || Sbjct 477364 ACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACTCCCATCTTCC 477423 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | ||| || ||||||||||| |||||||| | ||| || Sbjct 477424 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTAATCCTGG 477483 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA--ACTTCTAGAGTTATAGTTT 193329 || |||| |||| |||| || ||||| || | ||| || | ||||| || || | Sbjct 477484 ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAGACCTTGAGAGTGATGGTCT 477543 Query 193330 TACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | || || || ||||| ||||| || ||||| || Sbjct 477544 TCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 477577 >seq18141 Length=859620 Score = 96.9 bits (106), Expect = 6e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280 || ||||| || | | | || ||||||||||| |||||||| ||||| || || |||| Sbjct 86163 CCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCC 86222 Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 |||| |||| || ||||| || |||||||| | ||||| || ||||| || | || Sbjct 86223 TTTACATTTTCTATCGTATCCGAGGACTCAACCTTGAGAGTGATGGTTTTCCCCATGAGA 86282 Query 193341 GTTTTTACAAATATTTGCATTTT 193363 |||||||| | || ||||| || Sbjct 86283 GTTTTTACCAGAATCTGCATCTT 86305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898509938392080