Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq10317 98.7 2e-15 seq101756 96.9 7e-15 seq5013 93.3 8e-14 seq5337 91.5 3e-13 seq6212 87.8 4e-12 seq1886 86.0 1e-11 seq16037 84.2 4e-11 seq11838 84.2 4e-11 >seq10317 Length=1945714 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || || ||||| || || | |||| |||| ||| || |||||||||| Sbjct 477384 CTTTTGA-ATGTTGTAGTCAGACAAAGTACTCCCATCTTCCAGTTGCTTGCCAGCAAAGA 477442 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | ||| || |||||||| || |||||||| | ||| || || || |||||||| Sbjct 477443 TCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTAATCCTGGATCTTGGCCTTTACATTTT 477502 Query 192467 TTATAGAATCTGACGATTC--TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 192524 ||| | ||| || | ||| || | ||||| ||||| || || || | ||||| | Sbjct 477503 CTATCGTATCCGAGGGTTCAAGACCTTGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCAC 477562 Query 192525 AAATATCTGCATTTT 192539 ||| |||||||| || Sbjct 477563 AAAAATCTGCATCTT 477577 >seq101756 Length=12694434 Score = 96.9 bits (106), Expect = 7e-15 Identities = 161/231 (70%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||| | || || | ||| | | | | ||| || | || || || ||| | Sbjct 2033818 ACCACCACAAAGTCTCAACACAAGATGAAGAATGGACTCCTTTTA-ATGTTGTAGTCAAA 2033760 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 |||| ||| | |||| | | || ||||||||||||| ||| || | ||||| || Sbjct 2033759 GTATGTCCGT----CTTCCAGTAGCTTGCCAGCAAAGATTAGTCTTTGCTCATCAGAAGG 2033704 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| ||||| || || || ||||||||| ||| ||| || | ||| || Sbjct 2033703 AATTCCTTCCTTATCCTGGATCTTGGCTTTTACATTTTCTATTATATCCGAGGGTTCAAC 2033644 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || ||||| ||||| || || || | ||||| || || |||||||| || Sbjct 2033643 CTCGAGAGTGATGGTCTTCCCTGTGAGGGTTTTCATGAAAATCTGCATCTT 2033593 >seq5013 Length=2647604 Score = 93.3 bits (102), Expect = 8e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 192361 TAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGA 192420 || ||||| || || || | || |||| ||| || ||||||||||| | ||| || ||| Sbjct 792779 TAGTCAGACAAAGTGCGCCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGA 792838 Query 192421 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480 ||||| || |||||||| ||||| || || || || ||||| ||| ||| || Sbjct 792839 TCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCTATCATATCCGAG 792898 Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| ||||| || ||| | | || || | ||| |||||||| || Sbjct 792899 GGTTAAACCTCGAGAGTGATGGTCTTCCCAATGAGGGTCTTCACAAAAATCTGCATCTT 792957 >seq5337 Length=12391395 Score = 91.5 bits (100), Expect = 3e-13 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 192305 TAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCT-TTAGAGATATTATAA 192363 ||| |||||| | ||| | || || | ||| | ||| | || || || || || || Sbjct 8351689 TAACACCACCACGAAGTCTCAACACAAGATGAAGAGTGGATTCCGTTTGA-ATGTTGTAG 8351747 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 ||||| || || ||| |||| |||| ||| || ||||||||||| | || | |||||| Sbjct 8351748 TCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCA--GTCCGCTGATCA 8351805 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || |||||||| ||||| || || || ||| | || ||| | |||||| | | Sbjct 8351806 GGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTCCGTTTTCTATCGTATCTGAGGGT 8351865 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || |||| ||||| || || || | ||||| | |||||||| || Sbjct 8351866 TCAACCTCCAGAGGGATGGTCTTCCCTGTGAGGGTTTTCACGTTAATCTGCATCTT 8351921 >seq6212 Length=5399887 Score = 87.8 bits (96), Expect = 4e-12 Identities = 119/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 192376 CGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCT 192435 ||| |||| |||||||| |||||||||||||| | ||| || |||||||| || |||||| Sbjct 3998856 CGTCCATCTTCCAATTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCT 3998915 Query 192436 TCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGA 192495 || ||||| || || || |||||||| ||| ||| || | ||| ||| || Sbjct 3998916 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTCTATCCGAAGGTTC--AGTCTTGA 3998973 Query 192496 GTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | | |||| || || || | ||||| | || |||| ||| || Sbjct 3998974 G-AGTGGTGTTCCCTGTGAGGGTTTTCACGAAAATCTACATCTT 3999016 >seq1886 Length=2416846 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || | ||| | ||||| ||| || | || || || ||||| || | | |||| Sbjct 2262501 AACACAAGATGAAGAGTAGACTCCTTTGGAATGTTGTAGTCAGACAAAGGATATCCATCT 2262442 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 |||| ||| || ||||||||||| | ||| || |||||||| || |||||||| |||| Sbjct 2262441 TCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTC 2262382 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || || || ||||| || | || | || | ||||| | || ||||| ||| | Sbjct 2262381 TGGATCTTGGCCTTTACCTTTTTAATTGTGTCCAAGGATTCAATCTCGAGAGTGATGTTC 2262322 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || | | ||||| || || |||||||| || Sbjct 2262321 TCTCCCATAAGGGTTTTCATGAAAATCTGCATCTT 2262287 >seq16037 Length=1108392 Score = 84.2 bits (92), Expect = 4e-11 Identities = 132/188 (70%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || || ||||| || || | | |||| ||| ||| || |||||||||| Sbjct 5962 CTTTTGA-ATGTTCTAGTCAGACAAAGTACATCCATCTCCCAGTTGCTTGCCAGCAAAGA 5904 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | ||| || |||||||| || |||||||||||||| || || || || ||||| Sbjct 5903 GGAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGGATATTGGCCTTAACATTTT 5844 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 | | | ||| || | | | | | ||||| ||| | || || || | ||||| | || Sbjct 5843 CTGTTGTATCCGAGGGTCCAGCCTTAAGAGTGATGATCTTCCCTGTAAGGGTTTTCACAA 5784 Query 192527 ATATCTGC 192534 | |||||| Sbjct 5783 AAATCTGC 5776 >seq11838 Length=10179742 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/158 (72%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441 || |||| ||| || ||||||||||| | ||| || ||||||| || |||||||| ||| Sbjct 167892 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCCGATCAGGAGGAATTCCTTC-TTA 167834 Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501 | || || | ||| ||||| ||| | ||| || | ||| || || ||||| ||| Sbjct 167833 GCCTGGATCCTGGCTTTGACATTTTCTATCGCATCCGAGGGTTCAACCTCGAGAGTGATG 167774 Query 192502 GTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || || | ||||| | || |||||||| || Sbjct 167773 GTCTTCCCCGTGAGGGTTTTCACGAAAATCTGCATCTT 167736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983196321453150