Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq10844 87.8 3e-12 >seq10844 Length=7385475 Score = 87.8 bits (96), Expect = 3e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || || ||||| || || || | || || || | || | |||||| |||||| || Sbjct 3309442 ATGATGCCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAG 3309383 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 ||||| | || || | || || | ||||| || |||||||| | | ||| |||||| Sbjct 3309382 TCTGAGAGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCA 3309323 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || || || || ||||| |||||| ||| ||||| || || || | Sbjct 3309322 GGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGC 3309263 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || ||||| || ||||| | || || | || |||||||| Sbjct 3309262 TCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3309210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903984565180200