Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq10844 140 2e-28 seq12718 125 5e-24 seq7603 125 5e-24 seq5013 113 3e-20 seq10317 111 1e-19 seq13340 104 2e-17 seq18779 91.5 1e-13 seq3796 91.5 1e-13 seq5424 89.7 4e-13 seq16037 84.2 2e-11 >seq10844 Length=7385475 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | |||||||||||| || || ||||| ||||| ||||| || || || | Sbjct 3309436 CCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAG 3309377 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||| ||| | |||| | ||||| || || || Sbjct 3309376 AGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 3309317 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | ||| ||||||| | || | |||||| | || || Sbjct 3309316 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACC 3309257 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || |||||||| | ||| || ||||| |||||||| Sbjct 3309256 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3309210 >seq12718 Length=1038120 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | |||||||||||| || || ||||| ||||| | ||| || || || | Sbjct 56381 CCGCCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTAAATATTGTAGTCTGAG 56322 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || |||||||| ||| | |||| | ||||| | || || Sbjct 56321 AGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTTAGGTGGG 56262 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| ||||||| | || | |||||| | || || Sbjct 56261 ATGCCGTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACC 56202 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || |||||||| | ||| || ||||| |||||||| Sbjct 56201 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 56155 >seq7603 Length=6857920 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | |||||||||||| || || |||| ||||| ||||| || || || | Sbjct 2062647 CCACCCCTGAGACGCAGCACCAAGTGCAGGATGGACTCTTTCTGAATATTGTAGTCTGAG 2062706 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || |||||||| || | |||| | ||||| || || || Sbjct 2062707 AGAGTGTGACCATCCTCTAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGTGGG 2062766 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | ||| ||||||| | || | |||||| | || || Sbjct 2062767 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACC 2062826 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || |||||||| | ||| || ||||| |||||||| Sbjct 2062827 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2062873 >seq5013 Length=2647604 Score = 113 bits (124), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 |||||| | |||||||||||| || ||| |||||| | || | | ||||| || Sbjct 792745 CAGCACAAGATGAAGCGTGGAGTCCTTTAGAATGT---AGTCAGACAAAGTGCGCCCGTC 792801 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 792802 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 792861 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || |||||| |||||| | || || ||| || || ||||| || || Sbjct 792862 CTGGATCTTGGCCTTGACATTTTCTATCATATCCGAGGGTTAAACCTCGAGAGTGATGGT 792921 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||| | | ||| || ||||| |||||||| || Sbjct 792922 CTTCCCAATGAGGGTCTTCACAAAAATCTGCATCTT 792957 >seq10317 Length=1945714 Score = 111 bits (122), Expect = 1e-19 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||||||||| || ||||||||||| || || | | || | ||| Sbjct 477360 CAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACTCCCATC 477419 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || | || Sbjct 477420 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTAATC 477479 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTC--TACTTCAAGAGTTATA 29751 || | || || ||| |||||| || || || |||| || | ||||| || Sbjct 477480 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAGACCTTGAGAGTGATG 477539 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || | |||||| ||||| |||||||| || Sbjct 477540 GTCTTCCCCGTGAGGGTTTTCACAAAAATCTGCATCTT 477577 >seq13340 Length=2707246 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| ||||| |||| || || ||||| ||||| || ||||| || || | Sbjct 1286616 CCCCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1286675 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || || || ||||| || | |||| | ||||| || || || Sbjct 1286676 AAGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1286735 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || |||||| | || | |||||| | || || Sbjct 1286736 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 1286795 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || ||||| || || || |||||||| Sbjct 1286796 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1286842 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||||| |||| || || ||||| ||||| || ||||| || || | Sbjct 1287528 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287587 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || || || ||||| || | |||| | ||||| || || || Sbjct 1287588 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287647 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || |||||| | || | |||||| | || || Sbjct 1287648 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 1287707 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || ||||| || ||||| || || || ||||||||| Sbjct 1287708 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATT 1287755 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||||| |||| || || ||||| ||||| || ||||| || || | Sbjct 1286844 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1286903 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || || || ||||| || | |||| | ||||| || || || Sbjct 1286904 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1286963 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || ||||| | || | |||||| | || || Sbjct 1286964 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 1287023 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || ||||| || || || |||||||| Sbjct 1287024 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1287070 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||||| |||| || || ||||| ||||| || ||||| || || | Sbjct 1287072 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287131 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || || || ||||| || | |||| | ||||| || || || Sbjct 1287132 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287191 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || ||||| | || | |||||| | || || Sbjct 1287192 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 1287251 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || ||||| || || || |||||||| Sbjct 1287252 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1287298 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||||| |||| || || ||||| ||||| || ||||| || || | Sbjct 1287300 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287359 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || || || ||||| || | |||| | ||||| || || || Sbjct 1287360 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287419 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || ||||| | || | |||||| | || || Sbjct 1287420 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 1287479 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || ||||| || || || |||||||| Sbjct 1287480 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1287526 >seq18779 Length=146304 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| ||| | ||| || ||||| || ||||||||||| || || | | || || Sbjct 86547 CGCAACACAACATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGTACGTCTG 86606 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| ||| ||| | | ||||||||||||||||| || |||| || || || Sbjct 86607 TCTTCCAGTTGCTTGTCAGTAAAGATCAATCTTTGCTGATCAGGAGGAACTCCTTCCTTA 86666 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || | | |||||| || || || || | || | ||||| | Sbjct 86667 TCCTGGATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTACAACCTTGAGAGTGGTG 86726 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || | ||| || ||||| |||||||| || Sbjct 86727 GTCTTCCCCGTGAGGGTCTTCACAAAAATCTGCATCTT 86764 >seq3796 Length=456941 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 7/207 (3%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| ||||| |||||||||||||| || || | || || || || ||||| Sbjct 356740 TGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAAAGAACGTCCG----TCTTCCAGTTGC 356685 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT-CTTGTAATTT 29702 ||||||||| | |||| |||||||||| | || ||||| || || | | || || | | Sbjct 356684 TTGCCAGCAAAGATCAGTCTTTGCTGACCAGGAGGAATTCCTTCCTCATCCTAGT--TCT 356627 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | || | ||| ||||| || | | |||| || || | ||| || || || || || Sbjct 356626 TGGTCTTACATTTTCTGTTGTAGCCAAGGGTTCAACCTCGAAAGTAATGGTCTTACCCGT 356567 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 || | |||| ||||| |||||||| || Sbjct 356566 TAGGATTTTCACAAAAATCTGCATATT 356540 >seq5424 Length=3103736 Score = 89.7 bits (98), Expect = 4e-13 Identities = 143/202 (71%), Gaps = 9/202 (4%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 ||||| || ||||||||||| || || | || || | || | ||||| |||||| Sbjct 2558629 GTGGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTACTTCTGTCTTACAGTTGCTTGCCA 2558688 Query 29650 GCA-TATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TT 29707 ||| || ||| |||||||||||| || ||||| || ||||| || || ||| || | | Sbjct 2558689 GCAGTAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG-AATCTTGGCCT 2558747 Query 29708 TGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGG 29767 | ||| |||||| || || || | ||||| || || || || || || | || Sbjct 2558748 TTACAATTTCTATTGTATCCGAGGG------TTCAACCGTGATGGTCTTCCCCGTAAGGG 2558801 Query 29768 TTTTAACAAATATCTGCATTTT 29789 |||| |||| ||||||||||| Sbjct 2558802 TTTTCTCAAAAATCTGCATTTT 2558823 >seq16037 Length=1108392 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| ||| | || ||||||||||| || || | | || | ||| | ||||| Sbjct 5976 TGAAGTGTGCACTCCTTTTGAATGTTCTAGTCAGACAAAGTACATCCATCTCCCAGTTGC 5917 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||||| | | | |||||||||||| || ||||| || ||||| || || | || Sbjct 5916 TTGCCAGCAAAGAGGAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGGATATTG 5857 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| ||||| || || || || | | | |||||| || | || || || Sbjct 5856 GCCTTAACATTTTCTGTTGTATCCGAGGGTCCAGCCTTAAGAGTGATGATCTTCCCTGTA 5797 Query 29764 AAGGTTTTAACAAATATCTGC 29784 | |||||| ||||| |||||| Sbjct 5796 AGGGTTTTCACAAAAATCTGC 5776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384741408894429