Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq15974 158 9e-33 seq15893 131 1e-24 seq8777 113 3e-19 seq17378 87.8 1e-11 seq10133 86.0 5e-11 >seq15974 Length=4457349 Score = 158 bits (174), Expect = 9e-33 Identities = 396/596 (66%), Gaps = 8/596 (1%) Strand=Plus/Minus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343 |||||||| |||| ||||| || || | || |||| | ||||| || | | Sbjct 3334682 GTTCCACCTCCCAAGTCAAAGATCAGCATGTTTCTTTCAACTCCAACCTTTTTGTCTAAA 3334623 Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| ||||||||||||||| ||||| || ||||| | ||||| ||||||||| Sbjct 3334622 CCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCTAAGTACATTGAGACCAGCA 3334563 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || |||| |||||||| ||||| || || || || || || || ||||| || || Sbjct 3334562 ATAGTTCCAGCATCTTTGGTGGCCTGATGCTGAGAGTCATTGAAGTAAGCAGGTACTGTG 3334503 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 | ||| |||| || || || |||| || || || ||| ||||| || | Sbjct 3334502 ACAACAGCATTGGTAACAGTCTTCCCAAGGTAGGCTTCTGTGATTTTCTTCATCTTTGTC 3334443 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATT---TTGATATGAT 282580 |||||||| ||||| | | ||||||| || | |||| || | ||| ||| Sbjct 3334442 AAAATCATGGATGACACCTCTTCTGGATAAAA--GCTTTTTGTCTCTCCCTTG-TATTCC 3334386 Query 282581 ACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCT 282640 | || | | || | | | | || | || | || ||||||| ||| | || Sbjct 3334385 ATTTGGACCTTGGGCCTGCCAGTATCTTTTACCACCATGAAAGGCCAATGCTTCTTGTCA 3334326 Query 282641 GATTGAACACTTTGGTCATTAAAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGT 282699 | || ||| ||| | |||||| | ||||| || | || |||||||| | || Sbjct 3334325 TACTGGACAACAGCATCA-TCAAATCTACCTCCAATCAAGTGCTTGGCATCAAAGACCGT 3334267 Query 282700 ATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTC 282759 ||||| ||||| | ||| |||||| || || ||||| | |||| | || || | Sbjct 3334266 GTTGGTAGGATTCATTGCTACTTGATTCTTTGCAGCATCACTGATCAATCGCTCAGTATT 3334207 Query 282760 TGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 282819 ||||| | |||||| || || || | || ||||||||| | ||| ||||| || Sbjct 3334206 AGTAAAGGCAACATAACTCGGGGTGGTTTGGTTTTTTTGATCATTGGAAATTATTTCCAC 3334147 Query 282820 TTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 ||| |||| || ||||||| |||||| | | || || || | |||||| |||| Sbjct 3334146 TTTTCCATGCTGGAATACACCCACACAAGTGTAGGTGGTGCCAAGATCAATGCCAA 3334091 >seq15893 Length=868954 Score = 131 bits (144), Expect = 1e-24 Identities = 330/496 (67%), Gaps = 8/496 (2%) Strand=Plus/Plus Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 |||||| | || || |||| |||||||| ||||||||||| |||||||| | ||||| Sbjct 353593 TTTATCTAAGCCGTAGGCAATGGCAGCAGCTGTTGGTTCATTGATAATTCTTAGCACATT 353652 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 ||||| ||||| |||||||| || ||||| || | ||| || || || ||||| || Sbjct 353653 GAGACCTGCAATCACGCCTGCATCCTTGGTGGCCTGGCGTTGAGAGTCATTGAAATAGGC 353712 Query 282454 AGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513 || ||||| || || || | || | | || | | |||| || || | || Sbjct 353713 TGGCACAGTGATCACAGCGTTGGTGATGGAATGGCCCAAAAAAGCCTCAGCAGTCTCCTT 353772 Query 282514 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTGGATTCATTT 282571 ||| ||| | | | ||| || || |||| ||| || |||| | || | | || Sbjct 353773 CATCTTAGTCAGCACCATAGAGGAGATTTCTTCAGGGTAGAA-AGCCTTTTTCTCCCCTT 353831 Query 282572 TGATATGATACTTCAAAA--TATGGTTTATTACCAACATTAATAACTTTAAATGGCCAAT 282629 || || ||||| ||| | | || || | || || | || |||| ||| ||||| Sbjct 353832 TG-TAGGATAC--CAATACTTTGGGCTTGCTTCCTTCACTGATTACTTGAAAAGGCCAGA 353888 Query 282630 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 282689 ||||||||||||||| || | |||||||| | ||| ||||| | ||||| |||| Sbjct 353889 GTTTCATATCTGATTGTACTACAGGATCATTAAATTTTCTGCCAATCAGGCGTTTAGCAT 353948 Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||| | ||| || ||||| | || | || | ||||| || || || || || Sbjct 353949 CAAAGACAGTGTTCTGAGGATTCATGGCTACCTGGTTCTTGGCCGCGTCCCCGATGAGCC 354008 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 | || || || || || | || || || || ||||| || || || || || || | Sbjct 354009 GCTCGGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGA 354068 Query 282810 TAATTTCAACTTTACC 282825 | || || || || || Sbjct 354069 TGATCTCCACCTTGCC 354084 >seq8777 Length=277399 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||| || |||| ||||||||||||||| ||||| || ||||| | ||| Sbjct 20386 TTTTTGTCTAAACCGTAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCTAAGTACA 20327 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| ||||| || | || || || || || || Sbjct 20326 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTGGCCTGACGCTGAGAGTCATTGAAGTAA 20267 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 ||||| || || | ||| |||| Sbjct 20266 GCAGGGACTGTGACAACAGCAT 20245 >seq17378 Length=6075925 Score = 87.8 bits (96), Expect = 1e-11 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 || || || ||| |||| || ||||| ||||||||||| || ||| | || ||||| | Sbjct 5144696 TGCACACTTATTCTGACTGAAGGAGACTCAGCTAAAACCTTGGCTGTTTCAGGCCTAGGT 5144637 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| ||||| | || || |||||||| |||||||||||| | | |||||| | Sbjct 5144636 GTGGTTGGGAGAGACAAGTACGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 5144577 Query 400417 GATGCT 400422 || ||| Sbjct 5144576 GAAGCT 5144571 >seq10133 Length=8053202 Score = 86.0 bits (94), Expect = 5e-11 Identities = 179/259 (69%), Gaps = 12/259 (5%) Strand=Plus/Minus Query 282620 AATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA-CCAATTAA 282678 || ||||||| ||||||||| ||||| ||| |||| ||| ||| | ||||| | Sbjct 4991070 AAGGGCCAATGTTTCATATCAGATTGGACAACAGCATCATCAAA-TCTACATCCAATCAG 4991012 Query 282679 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATC 282738 | | |||||||| | || ||||| ||||| | |||| ||| || || || ||||| Sbjct 4991011 GGGCCTGACATCAAAACT-GTGTTGGTAGGATTCATTGCAACTTAATTCTTCGCAGCATC 4990953 Query 282739 TCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 282798 | ||| ||| || || ||||| | |||||| | ||| || || | || ||||| Sbjct 4990952 ACTGATC----GTTTGGTGTCAGTAAAGGCAACATAAGGTGGGGTGGTTGGTTT-CCTTG 4990898 Query 282799 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACA--CCTACACAACTAAAAGTT 282856 |||||| ||||| ||||| | ||| | | || | ||| |||||| | | | || Sbjct 4990897 ATCATTGGCAATTATTTCCAATTTTCTGTGCTGGAAGACACTCCTACAAGAGT--AGGTG 4990840 Query 282857 GTTCCTAAATCAATACCAA 282875 | || ||||||||||||| Sbjct 4990839 ATGCCAAAATCAATACCAA 4990821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3735633972175794