Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq9426 122 8e-23 seq15553 116 3e-21 seq9416 87.8 2e-12 seq10479 86.0 6e-12 >seq9426 Length=1359787 Score = 122 bits (134), Expect = 8e-23 Identities = 396/611 (65%), Gaps = 8/611 (1%) Strand=Plus/Minus Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264 ||||||| | ||| ||| || | | | ||| | ||| |||| | |||||| | || | Sbjct 626222 ATGCCTTCTATGTTGCAGACCTGGAAAACATTCTAAAGAAACATCTGAGATGGTTAAAAG 626163 Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAGTCCTC- 20323 || | ||| | |||| || ||||| || || || | || ||| ||| | | Sbjct 626162 CTCTTCCTCAGGTCACCCCTTTTTATGCAGTCAAATGC---AATGACAGTAGAACCATAG 626106 Query 20324 --AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381 ||||||||| |||| || || || |||||||||||||| ||| || || | | Sbjct 626105 TGAAGACCCTAAATGCCATTGGGACGGGATTTGACTGTGCCAGCAAGACTGAAATATAAT 626046 Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441 | |||| | ||| || || | | |||| ||||| | ||| || |||||||| || Sbjct 626045 TGGTGCAGAGTCTTGGGGTGCTC-CAGAGAGGATCACCTATGCAAACCCTTGTAAACAAG 625987 Query 20442 CTTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAG 20501 || || || | |||||| || | | |||| | |||||||||| ||||| |||| Sbjct 625986 TATCTCAGATTAAGTATGCTGCCAATAACAGAGTCCAGATGATGACTTTCGATAGCGAAG 625927 Query 20502 AAGAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAA-GCTGGTACTGAGGATTAAA 20560 ||||| | ||| ||| | | || | | || || |||||| || ||||| Sbjct 625926 TTGAGCTGATGAAAGTTGCCAGGGTACATCCAAAGGCAAAAGCTGGTTTTGTGGATTGCC 625867 Query 20561 GTGGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCC 20620 |||||||| || | | | | || |||||||| ||||| || | || | || Sbjct 625866 ACTGATGACTCCAAAGCGGTCTGTCCTCTCAGTGTCAAATTTGGTGCCACAATCAAGACC 625807 Query 20621 AGCCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTC 20680 ||| | || | || | |||| | || | | || || ||| | ||||||||| Sbjct 625806 AGCAGGCTTCTCTTGGAATGGTCCAAGGAGCTAAACATTGATGTCATCAGTGTCAGCTTC 625747 Query 20681 CACGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGG 20740 ||| ||||||||||||| || || || | | | ||||| |||| ||| | Sbjct 625746 CACATGGGCAGTGGCTGACCTGACGCTGAGACCTTTGTGCAGGCCATCTCTGATGCCCGC 625687 Query 20741 AGAGCTTTTGACTTTGGCACGCTGATGGGCTTTGACATGTACCTCTTGGATATTGGTGGC 20800 | | |||||| | | | ||| || || |||||||||| ||||||||||||| Sbjct 625686 TGTGTCTTTGACATGGTGGCTGAGATTGGATTCAACATGTACCTTCTGGATATTGGTGGT 625627 Query 20801 GGCTTTCCCGG 20811 |||||||| || Sbjct 625626 GGCTTTCCTGG 625616 >seq15553 Length=457459 Score = 116 bits (128), Expect = 3e-21 Identities = 441/676 (65%), Gaps = 61/676 (9%) Strand=Plus/Plus Query 20663 GTGATCGGAGTCAGCTTCCACGTGGGCAGTGGCTGCAAAGATGCACAGG-CTTA--CAGA 20719 || ||||| |||||||| |||||||||||||||| | || ||| || ||| ||| Sbjct 450355 GTCATCGGTGTCAGCTTTCACGTGGGCAGTGGCTATACTGA--CACTGGACTTGTGCAG- 450411 Query 20720 AAAGCCATAGCTGAGGCCAGGAGAGCTTTTGACTTTGGCACGCTGATGGGCTTTGACATG 20779 ||||| |||| ||| | | | || ||| | || | ||| || || ||||| Sbjct 450412 ---GCCATCTCTGATGCCCGCTGTGTCTTAGACATGGGGGCTGAGATTGGATTCAACATG 450468 Query 20780 TACCTCTTGGATATTGGTGGCGGCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTT 20836 ||||| |||| |||||||| |||||||| || ||| |||| || ||| | ||| Sbjct 450469 TACCTGCTGGACATTGGTGGTGGCTTTCCTGG-ATC--TGAGGATGCAAAGCTTAAATTT 450525 Query 20837 GAGGACATTGCAGAAGTCATTAACGCGGCCTTGGAAAGGCATTTTCCA----------GA 20886 ||||| || | || || ||| | ||| |||| | | |||||||| || Sbjct 450526 GAGGAGATCACCAGTGTAATCAACCCAGCCCTGGACAAGTATTTTCCATCAGACTCGGGA 450585 Query 20887 TGATGCCAACCTGACAATTATTGGTGAACCTGGCAGGTACTACGCTACCTCGGCGCTAAC 20946 || | | ||||||| | || | ||| || ||||| ||||| | | | || || | || Sbjct 450586 AGA-GTCTGCCTGACACTCATAGCTGAGCCGGGCAGATACTATGTTGCATCAGCTTTCAC 450644 Query 20947 TATAGCTGTAACTGTGATTGCTAAAAAGT--GTGTTGAAGACACTC---CTGGAGATAAA 21001 | || || | | | ||||| |||||| || | |||| || ||| ||| | Sbjct 450645 GCTTGCGGTTAATATCATTGCCAAAAAGCTGGTCTCGAAGGAACCGGCTCTGACGATGAG 450704 Query 21002 AAGTTTA------------TGTATTATGTTAATGATGGCGTCTA-TGG-CAGTTTTAACT 21047 ||| | ||||||| || || | || || || ||| || ||||||| Sbjct 450705 GAGTCGAGCGAGAAGACCATGTATTACGTGAACAACGGAGTGTACTGGTCA--TTTAACT 450762 Query 21048 GCATATTATTTAACCATG--CTCGTCCTATGCCTATGCTGCTTAAAGAA----AAACGCC 21101 |||| | | || |||| | ||| | ||| |||||| ||||| |||| Sbjct 450763 GCATCCTCTACAATCATGTGCACGTG--AAGCCCCTGCTGCA-AAAGAGGCCCAAACCA- 450818 Query 21102 TTGAAGACAAAGACTATGTTTCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCA 21161 || ||||| |||| || ||||| ||||| || | ||| || ||| | ||| ||| Sbjct 450819 --GATGACAAGTACTACTCATCCAGCATCTGGGGACCAACCTGTGACGGCCTCGATCGCA 450876 Query 21162 TTGTTAAGCGGTGTGAACTGCCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACA 21221 | || |||| || | |||| ||| | || ||||| |||||| | | |||||||||| Sbjct 450877 TCGTGGAGCGCTGCGGCTTGCCGGAGATGCACGTGGGGGACTGGATGCTCTTTGAAAACA 450936 Query 21222 TGGGCGCTTACAGCTTGGTCAGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAG 21280 |||| ||||| | ||||| | ||| |||| || || || || |||| | |||| | Sbjct 450937 TGGGTGCTTATACCTTGG-CTGCTGCTTCTACTTTCAATGGGTTCCAGAGGCCAACGATC 450995 Query 21281 CACTATGTTATTTCAG 21296 ||||||| || |||| Sbjct 450996 TACTATGTGATGTCAG 451011 >seq9416 Length=73538 Score = 87.8 bits (96), Expect = 2e-12 Identities = 388/608 (64%), Gaps = 11/608 (2%) Strand=Plus/Plus Query 20372 GAGATTCAGTTACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCT 20431 || || ||||| |||| | ||| || || | |||| ||||| | | ||| || ||| Sbjct 57733 GAAATACAGTTGGTGCAGAGTCTTGGGGTGCCTCCAGAGAGGATCATCTATGCAAACCCT 57792 Query 20432 TGTAAGCAGCCTTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTT 20491 ||||| || || || || | || || || | | ||||| | ||||||||||| Sbjct 57793 TGTAAACAAGTGTCTCAGATTAAATACGCTGCCAATAACGGAGTCCAGATGATGACTTTT 57852 Query 20492 GATAGTGAAGAAGAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTG 20551 ||||| ||| ||||| | || ||| | |||| | || |||||||| || Sbjct 57853 GATAGCTAAGTCGAGCTGATGGAAGTTGCCAGGGCACACCCAAAGGCAAAGCTGGTGTTG 57912 Query 20552 AGGATTAAAGTGGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCT 20611 | ||| |||||||| ||| ||| | | || ||||| || ||||| || | Sbjct 57913 CGCATTGCCACCGATGACTCCAACGCAGTCTGTCGCCTCAGTGTTAAATTTGGTGCCACC 57972 Query 20612 ATTGAAGCCAGCCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGA 20671 | | ||||| | || | | | |||||| | || | | || || ||| | Sbjct 57973 CTCAAGACCAGCAGGCTTCTTTTGGAGCGGGCCAAGGAGCTAAACATCGATGTCATCAGT 58032 Query 20672 GTCAGCTTCCACGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCT 20731 |||||||| ||||||| |||||||| | || | |||| | | ||||| || Sbjct 58033 GTCAGCTTTCACGTGGTGAGTGGCTGTACTGACCCTGAGGCCTTTGTGCAGGCCATCTCT 58092 Query 20732 GAGGCCAGGAGAGCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGG 20789 || ||| | | | |||||| | || ||||| | || || |||||||||| ||| Sbjct 58093 GATGCCCGCTGTGTCTTTGACATGGG--GGCTGAGGTTGGTTTCAACATGTACCTGCTGG 58150 Query 20790 ATATTGGTGGCGGCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTG 20846 | ||||| || |||||| || ||||| |||| || ||| | |||||||| | Sbjct 58151 ACATTGGCGGTGGCTTT-CCTGGATC--TGAGGATGCAAAGCTTAAATTTGAGGAGGTCA 58207 Query 20847 CAGAAGTCATTAACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTA 20906 | || || ||| | ||| |||| | | ||||||| ||| | ||||| | | Sbjct 58208 CCAGTGTAATCAACCCAGCCCTGGACA-GAGTTTTCCATCAGATTCGGGAGTGACACTCA 58266 Query 20907 TTGGTGAACCTGGCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTG 20966 | | ||| || ||||| ||||| | | | || || | || | || || | | | |||| Sbjct 58267 TAGCTGAGCCGGGCAGATACTATGTTGCGTCAGCTTTCACGCTTGCGGTTAATATCATTG 58326 Query 20967 CTAAAAAG 20974 | |||||| Sbjct 58327 CCAAAAAG 58334 >seq10479 Length=2664821 Score = 86.0 bits (94), Expect = 6e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | ||| || ||| | ||| |||| || |||| || | || Sbjct 1299772 TCCAGCATCTGGGGACCGACCTGTGACGGCCTCGATCGCATCGTGGAGCGCTGCGGCTTG 1299713 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || ||||| |||||| | | |||||||||||||| ||||| | | ||| | Sbjct 1299712 CCCGAGATGCACGTGGGGGACTGGATGCTCTTTGAAAACATGGGTGCTTATACCGTGG-C 1299654 Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCAG 21296 ||| |||| || || || || |||| | |||| | ||||||| || |||| Sbjct 1299653 TGCTGCTTCTACTTTCAATGGGTTCCAGAGGCCAACGATCTACTATGTGATGTCAG 1299598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462955917847920