Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq13359 93.3 4e-14 >seq13359 Length=6312339 Score = 93.3 bits (102), Expect = 4e-14 Identities = 88/110 (80%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 171 CACAAGATACAAAACAG-GTTATCAGAAAAATTCAGTATAATTTATTAAATAATTTTCAA 229 ||||| || |||||||| ||||| ||||||||||| |||||||||||||||| | ||| Sbjct 2721226 CACAACATGCAAAACAGAGTTATGAGAAAAATTCAAAATAATTTATTAAATAAGTGCCAA 2721167 Query 230 GGGCTTCTTTAAGAAGCATTAACAATCTAACAACATTTTATAAATAACAA 279 ||||| || ||| ||||||||||| || || || ||||||| ||| Sbjct 2721166 GGGCTCCTCCAAGGAGCATTAACAAACTCTCA--ATACAATAAATATCAA 2721119 Score = 91.5 bits (100), Expect = 1e-13 Identities = 193/285 (68%), Gaps = 21/285 (7%) Strand=Plus/Minus Query 1479 TACCTGAGGGGGATACTATAGCAGGAGAGAGCGAGGCCGCCGCTTTGGCAACAGCTGCTA 1538 |||||| | |||| | || | ||| ||||| ||| |||| |||||||| ||| Sbjct 2718951 TACCTGTGTGGGAGGCCATGGTGAGAGGGAGCGGAGCCT--GCTTCAGCAACAGCCGCTT 2718894 Query 1539 GAGTGAGATGTGCTCGCTATA-CTTTTAGGGAACTGTATATAAAGGGCTAGTTGTAAGGA 1597 ||| ||||||| |||| || | | ||| | |||||||||||| | || |||| Sbjct 2718893 GAGCCAGATGTGTTCGCCATGGCCTCCAGGTGA---TATATAAAGGGCCCGCCGTGAGGA 2718837 Query 1598 GGAGCACTAAAAGTACCGCCCACGGTAAAGTCATTACTCAG-----------AAAACA-T 1645 | | | | || ||||||| || || | ||| ||||| |||||| | Sbjct 2718836 AGGACGATCGATGTTCCGCCCATGGCAAGATTATTGCTCAGCTTTTCTCCAGAAAACACT 2718777 Query 1646 TTCAAATTTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAGGAAATG---AAGTTA 1702 |||||| || |||| | | || | |||||| |||| |||||||||| | |||| Sbjct 2718776 TTCAAAATTTTGCCGCCCAAGGCTGAGTGAAAGCAGGGCTGGAAGGAAATGCTGAGGTTA 2718717 Query 1703 CCCTTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGG 1747 |||| ||| ||||||||||| |||| || |||| |||||| || Sbjct 2718716 CCCTCAAGGTGGGCAGATGCCTGACTCAGTGCAGGCACACACAGG 2718672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438002102342000