Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq13404 257 2e-63 seq101758 170 2e-37 seq1135 165 9e-36 seq5233 93.3 5e-14 >seq13404 Length=4903880 Score = 257 bits (284), Expect = 2e-63 Identities = 639/967 (66%), Gaps = 22/967 (2%) Strand=Plus/Minus Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118 |||||| ||| | | |||| ||| || | |||||||| || || | ||| ||| Sbjct 41297 CCAGGGCTTTAAGCCTCAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCCA 41238 Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178 || ||||| || || |||| ||| ||| || || |||||| || | || || | Sbjct 41237 TGTCAAACTTATTGGCAAACAAGTGGTGC---TTGCGCAGTATCCAGTTCAAGTCACCTG 41181 Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238 || || || |||||||| ||||||||||| ||| |||| || ||||| | || || | Sbjct 41180 CCCCAAAAACACACACGGAGCGCACGTGCACCCCGTTGCAGGGTGGATAGGGTGCGCCCT 41121 Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298 || || || || || |||| ||||| || || ||||||| || || ||||| |||| Sbjct 41120 TGTAAACGTCACCTTCAAAGTACTGCCATTTGACAAACCTAGCAATTGCTTGCATATCGG 41061 Query 162299 AGGTGTCGTACTTGTACACTGACGG-CACGGCTCCAGGAACACCCGGCAGTCTCTGTAGA 162357 | |||||||||| | ||| | || || | ||||| || | || | ||||| | | Sbjct 41060 ACATGTCGTACTTATG-ACTTAAGGACAGTGAGCCAGGGACTTCAGGGATCCTCTGAATA 41002 Query 162358 GTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTG 162417 || ||||| || | ||||| ||||| || || || || | ||||||||| |||| | | Sbjct 41001 GTGGCCCAGAGATACTCGTCCGGACTGTATGTGTCTTTTGCCCACTCCATAAACTTCTGG 40942 Query 162418 ACCGTTTTATCGTATAGAATGTA-----AGAGACGTAGGACCTGGTCACAATAAAGTACG 162472 | ||| || | ||| | ||| || | || || | Sbjct 40941 ATTTTTTCATTCTCTAGCACGTACTCTNNNNNNNNNNNNNNNNNNNGACCACGAAATAAG 40882 Query 162473 CGCTACCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGA 162532 |||| || ||||||| || | | |||||| || ||||||| ||||| || Sbjct 40881 CGCTGCCCGAAAACAGAGGCGTTTCAAGAGGAGGTTGCACTTTGTCAGTCCCCGTATTTG 40822 Query 162533 CTACCATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACG 162592 | | |||| || || || || | ||| ||||||| | | ||| ||| || | Sbjct 40821 TCAGCTTTCCATCCACCACTACATAGTGCTTTTTCCACCTTTCTTTTTTA-TGG--GATG 40765 Query 162593 GGTGT---TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCT 162649 | | || |||||||| |||| ||| | | ||| |||| | || || | Sbjct 40764 GCATTCTCTCCGTCTCTAGGTTGTTTTCTCCCATTAGTGACTTGAGCTTCCTGACAATTT 40705 Query 162650 CTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAA 162709 | || ||||| |||| ||||| || ||||||| || || || | || ||||| Sbjct 40704 CCAGGTTGGTTTTAATAGGAAAATCCATGCCGCAAAGGTTGATCAGGTACTTCCAGCCTG 40645 Query 162710 CGCTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACG 162769 || | | || || ||| | | |||||| || ||||||||||| ||||||||||| | Sbjct 40644 CGTTTCTTTTGTGGAGGTCCCGCATACAGTTGAGGTCGGCCTGGACCCGACTCCACGATG 40585 Query 162770 CGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCC 162829 ||||||| || |||||| | | |||| |||||||| || |||||| || | || | Sbjct 40584 CGTACACCACAGTCTCCAGCTGACTGGCCACAAAGACGTTACTGAAACAGGATGCAATAC 40525 Query 162830 CCATCAC---GGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATA 162886 | |||| |||||| || | ||| |||| |||| | || || || | || || | Sbjct 40524 CAGTCACCGCGGCCAGGAAGGA-ATCC--TCCGATTTCTTGTCCACATGAATACAATAGA 40468 Query 162887 GATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTA 162946 ||||||||| ||||||||||||||| | || || ||||| || || || || || | Sbjct 40467 AATTCTGAGGCATGTAGATGGCCCTCAGGAGCCTGTCAAACATTTCAATTTTGTGATGAA 40408 Query 162947 CCACGATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAAAGT 163006 |||| || || || ||||| || ||||| ||||| || | || |||| || || || Sbjct 40407 CCACTATGGAGTATGCTATTGGAAACTCTGCCTCTTCTCTGCTAAGAGGTTCTACAATGT 40348 Query 163007 ACTTGCG 163013 | ||||| Sbjct 40347 ATTTGCG 40341 >seq101758 Length=7847725 Score = 170 bits (188), Expect = 2e-37 Identities = 401/594 (68%), Gaps = 15/594 (3%) Strand=Plus/Plus Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946 ||||||||||||| ||| || | | |||||| || | | || || | | | Sbjct 2097335 TCCAGTTAAAGTAACTAAGGTACAACTTATTGTTTTTGTCAACTTCCTTCAGATACTTTG 2097394 Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006 | || || | || || |||| || | ||| |||||||| | |||| | || | ||||| Sbjct 2097395 CTAGATCACTTGGAGAGTTGTAATCTTCCACATGAATGAATGAGTCTGCTGGAATGTAAT 2097454 Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066 |||| || || || || |||| || || || || ||||| | || |||| ||||| Sbjct 2097455 TTTCATAGTTTTCCCTAGATGGCCCCAGGACAATAGGTACGGAGCCAGCCAGAAGAGCAT 2097514 Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126 |||||| ||||| || || || || |||| | ||||| || || | || || |||| Sbjct 2097515 TGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCGAAGGAAAGGTAAAATT 2097574 Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184 |||| | ||||| |||| | || || | | || | ||| ||||| | | | | Sbjct 2097575 TACAAGTAGATATGGTAG--GAATCAAATTTTTATTATTCACATACTCTCCAAATGCTTG 2097632 Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATC-TCACGT 177243 ||| || ||| || || ||| ||| || ||||| ||| || || || | | ||| Sbjct 2097633 CCCATAGGTATGGATTTCAATGCTTTTGCTTAGCTCGTTGTAATA-CTTGACCCTGGCGT 2097691 Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCG-GGAACGGGA 177302 | || |||||| || || || |||||||| |||||||| |||||||| || || Sbjct 2097692 GCTCAGGGTTCCAGTTACTTACAACCCAGCACACTAACTT-CTCTTTGCTTGGCAC---- 2097746 Query 177303 TTCGAT-ACTAATGCAGTGTCT-CTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCG 177360 ||| | || || | || | | || | ||| | | ||||| ||||| || || || | Sbjct 2097747 TTCAAACACGAAGGG-GTTTGTGCTCACCGTCAATACGCCATAAGGCACTTGGATGTCTG 2097805 Query 177361 AGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATACCTTGTTTGAAGGGGC 177420 ||||||| | ||| || | ||||||||||| |||| || || || | || ||| Sbjct 2097806 AGTCGCGGCGGTAAGTCAGAGTGAGATTGAATAGGTGCTCGATGCCATTCTTCTGGGGCG 2097865 Query 177421 TGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCTGG 177474 ||| | | || ||||| || |||||||| ||||| || || |||| ||| |||| Sbjct 2097866 TGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCTGG 2097919 >seq1135 Length=2402129 Score = 165 bits (182), Expect = 9e-36 Identities = 232/323 (72%), Gaps = 2/323 (1%) Strand=Plus/Minus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 || |||| || || |||| | || || || || ||||| || || ||||| || | || Sbjct 126659 CAAAGAGGGTGAGGCAGGCTATTCCTGACATCTTCCCGGAACCGAAGGTATTGAAGAGAC 126600 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 || | |||| ||||| || |||| ||||| ||||| || || | || | || |||| Sbjct 126599 ACTTGTAACACCCTTCATCATCCAGAGTGGTATTCCAGAAGGTGATGGTTGTGTT-CTGA 126541 Query 171891 -GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGA 171949 |||| | | || ||||||| | ||||| || | || ||||| || || || || Sbjct 126540 AGTCCCAACTCAGTTATGTTCATCTTATCCTTATAGGCGGGTTGGACCACGACCCCATGC 126481 Query 171950 TTCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACT 172009 | || |||||| ||| |||||||||| ||||| | |||||| || |||||||| || || Sbjct 126480 TCCTTGCTGAAAGTGACCATGTTTTCTGGGCTTGAAGCCTTCATTTTCTGCCATGTCACA 126421 Query 172010 ATTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAAT 172069 || | ||||| | | |||| || |||||| |||||||||||||||||||| | Sbjct 126420 ATCACGACTTCCTGGGGAGTTTCCAGGAAGCATCGTAAAGAAGCAGGTGTGTTCAGTGGC 126361 Query 172070 TCCCTTTCGTCTTGCGTTACCAC 172092 || ||||| ||| | || ||||| Sbjct 126360 TCTCTTTCATCTCGGGTCACCAC 126338 Score = 116 bits (128), Expect = 4e-21 Identities = 160/223 (72%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562 |||| ||| |||| |||| | |||||||||| ||||| || | ||| |||||||||| Sbjct 129176 ACAGGTTGACTGAAGTCTTTCACAGTCCCCAGGTGTAGCACCTGGCAGATCACCTCCT-- 129119 Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622 | ||||| ||| | || || ||||| | || || ||||| | ||||| || ||||| Sbjct 129118 -TCCCCACCTGATTCTTGGGGTCTTTGATGTGGAGGATGCTGATGACAGACGTGGTCCCA 129060 Query 171623 TTACGATGTAGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAAT 171682 || | ||| | | | |||||| || || ||||| || || || || ||||| | Sbjct 129059 TTTGGGTGTGTGATAATCTCAGTACTGTTGTCCATTCCTGACCCAGCGACCTTCCAGGAG 129000 Query 171683 ATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725 || |||||||||| | ||| | ||||||||||| | |||| Sbjct 128999 ATTGCAGGAGCTGGGCGGGCATTGGCAGAGCAAGTGACATTTA 128957 >seq5233 Length=464420 Score = 93.3 bits (102), Expect = 5e-14 Identities = 231/345 (67%), Gaps = 8/345 (2%) Strand=Plus/Minus Query 162643 ACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTC 162702 |||||||| ||||||||| | |||||||| || ||||| ||| | | |||||| Sbjct 381131 ACCATCTCAGCATTGGTCTTTATAGGAAAGTCTGTTCCGCATGTATTCAGCAAGTATTTC 381072 Query 162703 CACTTAACGCTGAG-TCCGTA-CAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGAC 162760 || || |||| || | | || || | | ||||||||| || ||||| || | Sbjct 381071 CAGGGCAC--TGAGCTCTGGAGCAAGTCTTCCATACAGTTCAGGTCCGCCTGCACCCTGG 381014 Query 162761 TCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACG 162820 ||| || || || || || | ||||| || |||| | ||||||||| ||| || | Sbjct 381013 ACCAGGAGGCATAAACCACCCGAACCAACTTACTGGCTATAAAGACATTTGGGAAGCATG 380954 Query 162821 AAACTATCCCCATCACGGCCAGTGAGAACAT--CGGGTCCGCTTTCCTATCTACGTGTAC 162878 ||| || || | || ||| | ||| | | || | ||| ||| ||||| || Sbjct 380953 AAATAATTGCCCTGACTGCCTCTTTGAAAGTGTCTGGG--GACTTCTGATCCACGTGGAC 380896 Query 162879 GCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTT 162938 || |||| ||||||||||| || | || ||||| | || || || | || ||||| Sbjct 380895 ACAATATATGTTCTGAGGGGCATACACAGCTCTCAGCAGCCTTTCAAAGTTTTCAATCTT 380836 Query 162939 ATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983 | || ||||| ||||| || || || ||||| || |||||| Sbjct 380835 CTCATGGACCACCATAGAGTATGCAATAGGGAAGTCTAACTCCTC 380791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577696169422400