Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq18467 246 4e-60 seq1135 237 2e-57 seq8166 163 3e-35 seq3078 145 9e-30 seq6654 129 7e-25 >seq18467 Length=3096793 Score = 246 bits (272), Expect = 4e-60 Identities = 513/763 (67%), Gaps = 26/763 (3%) Strand=Plus/Plus Query 146800 GGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCC 146859 || || || | ||| ||||| | ||| ||||| | | |||| || || || ||| Sbjct 1468548 GGATGAGGATTGTACCCCTCAATCTGAAAGTCTTCAGTCTTGAAGTCATCGATTGTCTCA 1468607 Query 146860 ACCCGCCTCAAA--ATCTTGAGCTTGGGGAAGGGTCGGGGGT-TCCTGGCCAGCTGAATT 146916 || ||||| || |||||||| ||||| || || | || | | ||||| ||| Sbjct 1468608 ACTTT--TCAAAGGATTTTGAGCTTCGGGAAAGGCTTCGGTTCTCGTTGA-AGCTGCATT 1468664 Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 ||||| ||||| ||||| || | ||||| ||| || || |||| ||||||| ||||| Sbjct 1468665 TTCAGCGGCTCAACGTGATTCAAGTAGATGTGTGCATCTCCCAAAGTGTGCAGGAAGTCA 1468724 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || ||||| |||||||| | ||| || ||||||||||||||||| | ||||||||| ||| Sbjct 1468725 CCTGGCTTCAGGCCGGTGATGTGTGCGACCATGTAGGTGAGCAGGGTGTAGCTGGCGATG 1468784 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC 147096 |||||||| || || || |||||||| | |||||||||||||||||||| || || || Sbjct 1468785 TTGAAGGGCACACCTAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGGTCA 1468844 Query 147097 CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGG 147156 |||| ||||||| ||||| || ||| ||||| || ||||| ||||| | || || Sbjct 1468845 CCGTTCACCACGTAGAACTGACAGAGGGCATGGCATGGAGGCAGGGCCATTGAAGGAAGA 1468904 Query 147157 TCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCT 147216 || || ||||| || | | | | | ||| || ||||| | || || Sbjct 1468905 TCGTTTGGATTCCAAGCACACAGGATGATTCTTCTGTCGTCAGGGTTGGTTTTGATTGTG 1468964 Query 147217 TCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACG 147276 | || ||| ||| |||| | || || | || | || | || | Sbjct 1468965 CCAATCACCTTTTGCAGTCGGTCTGCTCCTTGATCGGAATAATCTGAATCCATATCTTTG 1469024 Query 147277 TACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTT 147336 || |||||||| ||||||||||| ||||| || || || || | || || Sbjct 1469025 TAGTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATC--------TT 1469076 Query 147337 CTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCC 147396 || | ||| ||||| | | || | || | |||||||||||| | Sbjct 1469077 CTTT------------TATGCTGGAGAATCCCAGGCTATCCATTGGCGTCCCAGATTCTT 1469124 Query 147397 ACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCC 147456 |||||||||| || || || |||| | ||||| ||| ||| ||||| |||| || | Sbjct 1469125 ACTCCCTTGGACGACAGTTCTTTAGCATTTGTGGATCCCTTGATAAACCACAGCAACTGC 1469184 Query 147457 TCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGTCCCTCAGC 147516 ||| || ||| |||| || || |||||| |||||||| || |||| | ||||| Sbjct 1469185 CCCAGGACACCCTTCCAGAACACATGCTTGGTTGTCAGCAGAGGAAACTCATGTCTCAGG 1469244 Query 147517 GAATACCTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGC 147559 || | |||||| || ||||| ||||| ||||| |||| Sbjct 1469245 CTGTAGCGCGCCTGCATGCCGAACACCGACAGGGTGCCGGTGC 1469287 >seq1135 Length=2402129 Score = 237 bits (262), Expect = 2e-57 Identities = 244/319 (76%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 |||||||||| ||||| || | || |||||||| || || || | ||||| |||| Sbjct 126338 GTGGTGACCCGAGATGAAAGAGAGCCACTGAACACACCTGCTTCTTTACGATGCTTCCTG 126397 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 | ||| | ||||| || ||||||| || ||||||||||| ||| | | | ||||| Sbjct 126398 GAAACTCCCCAGGAAGTCGTGATTGTGACATGGCAGAAAATGAAGGCTTCAAGCCCAGAA 126457 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| | ||||| ||||| || || ||||| |||||||| || || |||||||| ||| Sbjct 126458 AACATGGTCACTTTCAGCAAGGAGCATGGGGTCGTGGTCCAACCCGCCTATAAGGATAAG 126517 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 || ||||| || || | ||||| || ||| |||||||||| || ||||||||||| | Sbjct 126518 ATGAACATAACTGAGTTGGGACTTCAGAACACAACCATCACCTTCTGGAATACCACTCTG 126577 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 || || || ||||| ||||| || ||||| || ||||| || || ||||| || || || Sbjct 126578 GATGATGAAGGGTGTTACAAGTGTCTCTTCAATACCTTCGGTTCCGGGAAGATGTCAGGA 126637 Query 171372 GTGGCCTGCCTCACCCTCT 171390 | |||||||||||||||| Sbjct 126638 ATAGCCTGCCTCACCCTCT 126656 Score = 179 bits (198), Expect = 4e-40 Identities = 206/277 (74%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 |||||||||| || || || || |||||||| | ||| |||||||| || |||| || Sbjct 128911 GTGCAGCCCAAAGTATTCCTTCACTATAAATTATCTGAAGACCACCTAAATGTCACTTGC 128970 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 ||||||||||||||||| | ||| || | |||||| | | ||||||| ||| || Sbjct 128971 TCTGCCAATGCCCGCCCAGCTCCTGCAATCTCCTGGAAGGTCGCTGGGTCAGGAATGGAC 129030 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 ||||||| ||| || | | || | ||||| || || ||||| | ||| | ||||| Sbjct 129031 AACAGTACTGAGATTATCACACACCCAAATGGGACCACGTCTGTCATCAGCATCCTCCAC 129090 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 | ||||||||||||| |||| |||| |||||||| |||||||| ||| |||||||| Sbjct 129091 ATCAAAGACCCCAAGAATCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTACACCTGGGG 129150 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 | ||| | |||| || || |||| ||||| |||| Sbjct 129151 ACTGTGAAAGACTTCAGTCAACCTGTGAGCAAAGGTA 129187 >seq8166 Length=12950751 Score = 163 bits (180), Expect = 3e-35 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| |||||||| | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 4309621 CTTCAGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 4309680 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || || || |||||||| | |||||||||||||||||||| || ||||| |||| Sbjct 4309681 GGGCACACCTAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 4309740 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| ||||| || ||||| ||||| Sbjct 4309741 CACCACGTAGAACTGGCAGAGGGCATGGCATGGGGGCAGGGCCAT 4309785 Score = 86.0 bits (94), Expect = 7e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 |||||||| ||||||||||| ||||| || || || || | || || |||||| Sbjct 4311860 GCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATCTCCTTCTTTTCTGCTG 4311919 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 ||||| ||| | | || || || ||||||| | |||||||||||| | ||||||| Sbjct 4311920 GAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCATTGGCGTCCCAGATTCTCACTCCC 4311979 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 |||| || || || |||| | ||||| ||| ||| || Sbjct 4311980 TTGGACGACAGTTCTTTAGCATTGGTGGATCCCTGGAAGA 4312019 >seq3078 Length=2150095 Score = 145 bits (160), Expect = 9e-30 Identities = 132/167 (79%), Gaps = 12/167 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||||||| |||| ||||||| Sbjct 335501 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAAGAGGTGA 335560 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| |||||||||| | ||| ||||| ||||| ||||||| || |||| Sbjct 335561 TGCCCCAGGCCGAGA--CCCAG----------GGCCCCGACATCAAGGAGCCCGTGAACT 335608 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||| ||||| ||||| || || || ||||||||| ||| Sbjct 335609 CGCTGGGGGAGAAGCTGAAGACGCTGAGGCTGCAGCTGCGGCGCTGT 335655 >seq6654 Length=5182431 Score = 129 bits (142), Expect = 7e-25 Identities = 208/295 (71%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| || || ||| | |||| || | ||||| ||||||| |||| |||||||| Sbjct 4697608 GTACTCCCTAGTATTTGTCATTGGCCTTGTGGGCAACATCCTGGTGGTCCTGGTCCTCAT 4697667 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||||||||||||||| || |||||||| ||||| ||| ||||||||||| | ||| Sbjct 4697668 GCAGTACAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAACCTGGCCGTGTCTGA 4697727 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCA-CTCGGGGGGAACTGGTG 8788 |||||| | | |||| || ||||| ||| || ||| | | || || |||||| | Sbjct 4697728 CCTGCTCTTCCTCCTCACTCTGCCCTTCTGGGTTGACTACAATCTGAAGGATAACTGGAG 4697787 Query 8789 GGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGT 8848 | | | ||| |||| |||||||| | ||| |||| | || | | |||| Sbjct 4697788 GTT----CAGCGA-AGGCACA--TGTAAGTTGCTGTCGGGGCTTTACTACATAGGCCTGT 4697840 Query 8849 ACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGT 8903 |||| || || | || || |||||| |||| | |||||||| || || |||| Sbjct 4697841 ACAGTGAGATCTTTTTCATGATCCTGCTGACCATCGACAGGTACCTGGCCATTGT 4697895 Score = 91.5 bits (100), Expect = 2e-13 Identities = 208/306 (68%), Gaps = 13/306 (4%) Strand=Plus/Minus Query 9112 CTGCCTTTGCTTATCATGGCCTTCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGC 9170 ||||| |||| || |||| ||||||||| |||||||||| || | | | | Sbjct 4678324 CTGCCCCTGCTCATTATGGTGGTCTGCTACTCCGGAATCATCAAGACGCTGATGAGATGT 4678265 Query 9171 CCACAACAGGTCGAGAAACCTGCACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTA 9230 || || |||| | ||| | | ||| || |||||| || ||||| ||||| | | Sbjct 4678264 CC-CAGCAGG---AAAAAGCACAAGGCCATCCGGCTCATATTTATCATCATGGTGGTCTT 4678209 Query 9231 TTTTGTCTTTTGGATCCCCTACAACGTCCTGCTCATTTTACACACCTACCAAGAGGCCAT 9290 ||| | || ||| |||||||||| | || || || | | | |||||| | | Sbjct 4678208 TTTCATTTTCTGGGCCCCCTACAACCTGGTGGTCCTTCTCTCTGCTTTTCAAGAGATCTT 4678149 Query 9291 TTTTGGGC-CAGACTGTGAAGCGCGGCGCAG---GGTGGACATGGCCCTCTTGGTGGCTG 9346 |||| ||| ||| | |||| ||| | ||||| ||||| | |||| | | Sbjct 4678148 CTTTGACATCAG-CTGCGT---GCGGAGCAACCAGCTGGACGTGGCCTTGCAGGTGACGG 4678093 Query 9347 AGATGATCGCCTGCACCCACTGCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAA 9406 || ||||| ||| ||| ||||||||||||||||||||||||||||| || || || || | Sbjct 4678092 AGGTGATCTCCTACACGCACTGCTGCGTCAACCCCGTCATCTACGCCTTCGTCGGGGAGA 4678033 Query 9407 AGTTCC 9412 ||||| Sbjct 4678032 GGTTCC 4678027 Score = 86.0 bits (94), Expect = 7e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| |||||||| | || ||| | | ||||| |||||| |||| |||| || Sbjct 4611423 TACTCGCTGGTGTTCATCTTCGGGTTTGTGGGCAACCTGCTGGTGGTCCTCATCCTGATC 4611364 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 || | ||| | ||| | || |||||| |||||| |||| ||||||||||||| ||| Sbjct 4611363 AACTGCAAAAAGCTGAAGAGCATGACGGACATCTACCTGCTCAACCTGGCCCTCTCCGAC 4611304 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 ||||| | | ||||| | ||||| ||| ||||| Sbjct 4611303 CTGCTCTTCCTCCTCACCATGCCCTTCTGGGCTCACT 4611267 Score = 86.0 bits (94), Expect = 7e-12 Identities = 192/287 (67%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||| | |||||||| | | ||||| | ||||| | ||||| | | |||||| | Sbjct 4678831 TACGCCCTGGTGTTCGGGGTCGGGCTGCTGGGCAACGTGATGGTGGTGGTGATCCTCACA 4678772 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 ||||||| | | ||| | | |||||||||||| |||| ||||||||||| | | ||| Sbjct 4678771 AAGTACAGGCGCCTCTGCGTTCTGACCAACATCTACCTGCTCAACCTGGCCATCTGCGAC 4678712 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGGG 8790 |||| | | ||||| || ||||| ||||| |||| || | |||| || | Sbjct 4678711 TTGCTCTTCCTCTTCACGCTGCCCTTCTGGATCCACT--ATCTGAAGTGGAA----TGAG 4678658 Query 8791 TGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTAC 8850 |||| | |||| ||||| ||||| | || |||| | | | | ||||| Sbjct 4678657 TGGGTTTTTGGCCACTGTATGTGCAAGTTGCTCTCAGGGCTTTACTGCATCGGCTTGTAC 4678598 Query 8851 AGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGC 8897 | || || | || ||||||||| |||| | ||| ||||||| || Sbjct 4678597 GGGGAGATCTTTTTCATCATCCTGCTGACCTTAGACCGGTATCTGGC 4678551 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| |||||||| | || ||| | | ||||| |||||| |||| |||| || Sbjct 4625323 TACTCGCTGGTGTTCATCTTCGGGTTTGTGGGCAACCTGCTGGTGGTCCTCATCCTGATC 4625264 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 || | ||| | ||| | || |||||| |||||| |||| ||||||||||||| ||| Sbjct 4625263 AACTGCAAAAAGCTGAAGAGCATGACGGACATCTACCTGCTCAACCTGGCCCTCTCCGAC 4625204 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCA 8765 ||||| | || | || |||| | |||||||| Sbjct 4625203 CTGCTCTTCCTTCTGACGTTCCCAGTGTGGATTCA 4625169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582745737621600