Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq9940 127 3e-24 seq18010 123 3e-23 seq7184 104 3e-17 seq2520 86.0 9e-12 >seq9940 Length=104459 Score = 127 bits (140), Expect = 3e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || |||||||||||||| || || |||||||| ||||| | || Sbjct 69209 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 69150 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||||||||||||| |||||||| || ||||| ||||| || || | | |||||| Sbjct 69149 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 69090 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 69089 TTTCTTATACCAT 69077 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || |||| |||| ||| |||||||| ||||| || || || | || || || ||||| | Sbjct 20958 CACCACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCA 20899 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 |||| ||||||||||| || | ||||| | || || ||| |||| ||||| || |||| Sbjct 20898 GAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTAT 20839 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| ||| | ||| || || || | |||| ||||| || |||||||||| Sbjct 20838 CTAGTTCCACAGTAGTGACCCCACTGTATAAACCTTGGATTACTTTCATGG 20788 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| ||||||||||| || | || || || |||| | | | Sbjct 49819 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 49760 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| |||||||| | || || ||||||| || Sbjct 49759 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 49700 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCG 69743 || || || || || | |||| ||||| Sbjct 49699 TCCAGGTAAATAGCAAATGCTCCAGGTCG 49671 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || ||||| || | || ||||| || || || ||||| | |||||||| || ||| Sbjct 25730 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 25671 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 |||||||||||||| | || ||||| | |||||||| | | || | ||||||| Sbjct 25670 TATGTTTCAATAGCAGCATCGATATCTTCTTCGTGAATTCCCACAGATACCCTCATCAAC 25611 Query 70111 ATATGCTGAGGTCGTTC 70127 ||||| || |||| ||| Sbjct 25610 ATATGTTGTGGTCTTTC 25594 >seq18010 Length=2831715 Score = 123 bits (136), Expect = 3e-23 Identities = 403/623 (65%), Gaps = 21/623 (3%) Strand=Plus/Minus Query 39458 ACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGTAGA 39517 || ||||| ||||| ||||||| |||||||| || |||| || ||||| | Sbjct 1771533 ACGAATTCAATGTAACCCTTCATCAGAGTGCAATTCATCCCAATGAAATTCACTGGCAAG 1771474 Query 39518 GCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGATGTTACTACC 39577 ||||| || || ||||| | || || | || |||| || || ||| | || | || Sbjct 1771473 GCCTCTGTGAGGAACTCCTGCTCTATCCCAACAGCCTTGGTGATGATC--TCTTTCGCCC 1771416 Query 39578 TCATCACTC--GGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTA 39635 || | || ||| |||| | || | ||||| | |||||| ||||| || || | Sbjct 1771415 TCTACTCTGCAGGTTTGTGCAGCAGGTGACTGAACATCAGGCAGGCAAAGTCTCAGTGCA 1771356 Query 39636 GGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCT 39695 ||||| ||||| | | | | || ||| || |||| || |||| || || | | | Sbjct 1771355 AACCCTCTTCTCTGCCACTCAGTTGGTTGGAGAATG--AGGCCAGTCACCAGGTCTCATT 1771298 Query 39696 TTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAA 39755 | |||||||| ||||| | |||||||| |||| ||||| ||||| || Sbjct 1771297 TCTTGAGCCAGAATATCGGCGCAAAAGA-----------AGATTCCTTCCACTGCCTTAA 1771249 Query 39756 ATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTCTGTGCCCAAT 39812 | | |||| | ||||| || | || || | ||||| | ||||| Sbjct 1771248 ACCCTACAACACGTTCTCCATAGGCGGCCTCTTTGTCCCTGATCCAACGCAAGGCCCAGC 1771189 Query 39813 CAG-CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCA 39871 ||| || |||||| |||||||||| || || | || || ||||| | | |||| Sbjct 1771188 CAGGCTGCCTTCTTGGCACAAGGCATCGTCTCCACGGCGTTGAAGAGCAACTCCCTTTCC 1771129 Query 39872 TCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCA 39931 | |||||||| | || || || | ||||| |||||||| |||||||||||||| Sbjct 1771128 TGGGCATCTTTAATGTCAGTGTCAATGAGGAGACTGTACATTTCAGAATGGATGTTTTCC 1771069 Query 39932 ATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAAT 39991 || || || || || | ||| ||||| | |||| || || || || ||| | ||| Sbjct 1771068 ATGGCAATTTGGAAGCTGTAGAAACAGCAGCCTTCGGTGATCTGAACTTCTTGGCTAAAC 1771009 Query 39992 CTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGT 40051 | ||| |||| || || || || |||| || ||| | || || |||| || || Sbjct 1771008 CGCTCCACCAAGTTCTCCTTGGTGATGCCATGGCTGGCGACTAAGAAGGCCAGCACGTGC 1770949 Query 40052 TTAATAAAATATTTTTCATCGGG 40074 ||| || | |||| ||||| Sbjct 1770948 GAAATGAAGTGCCTTTCCTCGGG 1770926 >seq7184 Length=5150663 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||||||||| ||||| | || || Sbjct 2936603 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 2936544 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 | ||| ||||| |||||||| || || || ||||| || |||||||| || ||||| || Sbjct 2936543 AACCAGAATATAGCAGCAAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 2936484 Query 39761 AC 39762 || Sbjct 2936483 AC 2936482 >seq2520 Length=8653699 Score = 86.0 bits (94), Expect = 9e-12 Identities = 144/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 37354 GATCCAAA--CCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCATTCAGAT 37411 || ||||| ||| ||||| ||| | ||| |||||| | ||| ||||| | | | Sbjct 1838307 GAACCAAAACCCCCTGAGCCCCTTTCAGTGT--CATCTAAAACTTGAACTTCCTCTATTT 1838250 Query 37412 CAGGAT-AATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTTATTTTA 37470 | |||| || | || |||| | | || ||||| || |||| || || | |||| || | Sbjct 1838249 CTGGATTAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATT-TTTACTTCA 1838191 Query 37471 AAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCTTCATCG 37530 ||||| |||| ||| ||| | || | || |||| ||| || |||||||||||||| Sbjct 1838190 AAATTTTATTTGCCAAAATTAAATAGTACAACACCAAGATTTCCTCTATAATCTTCATCT 1838131 Query 37531 ATTACTCCGCCTCCTACATCAATA 37554 || || || |||||||||| ||| Sbjct 1838130 ATAACACCAGCTCCTACATCTATA 1838107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686034974729160