Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq14314 159 3e-34 seq6871 125 6e-24 seq7184 107 2e-18 seq18010 95.1 1e-14 >seq14314 Length=2618943 Score = 159 bits (176), Expect = 3e-34 Identities = 473/720 (66%), Gaps = 7/720 (1%) Strand=Plus/Plus Query 19222 TGGAA-TGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCG 19280 ||||| | ||||| | ||| ||| ||||| || ||||| ||||| || || ||||| Sbjct 1809463 TGGAACTTTGAAAAA-ATGGGAATAGGAGGTGTGGACAAAGAATTTTCAGATATTTTTCG 1809521 Query 19281 TAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACA 19340 ||||||||| || || || ||| || |||| | | |||| |||| || ||||| Sbjct 1809522 ACGAGCATTTGCTTCCCGAGTGTTTCCTCCAGAGATTGTGGAACACATGGGTTGCAAACA 1809581 Query 19341 TGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGA 19400 |||| || | || | |||||||| || |||||||| || || | | || || | Sbjct 1809582 TGTTAAAGGTATCCTGTTATATGGGCCCCCAGGTTGTGGTAAGACTCTCTTGGCTCGACA 1809641 Query 19401 ACTTAGTAAATTACTTACAAAACA-ACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAA 19459 || | || | | | | || | |||||| | || ||||| | |||| | | Sbjct 1809642 GATTGGCAAGATGTTGA-ATGCCAGAGAGCCCAAAGTGGTCAATGGGTCAAAAATTCTTA 1809700 Query 19460 ATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAG 19519 | |||||||| || |||| |||| || | || | |||||||| |||||||| | Sbjct 1809701 ACAAATATGTGGGAGAATCAGAAGCTAACATTCGTAAACTCTTTGCTGATGCTGAAGAGG 1809760 Query 19520 AACAAAA-ACGTTTAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGAC 19578 | |||| | | || | || || ||| ||||||||| || || | |||||| | || Sbjct 1809761 AGCAAAGGAGGCTTGGTGCT-AACAGTGGTTTGCACATCATCATCTTTGATGAAATTGAT 1809819 Query 19579 GCAATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAA 19638 |||| | | || | | | ||||| | ||||| ||||||||||| ||||| ||| Sbjct 1809820 GCAAGCAGAGAGGGAGCATGG-CTGGTAGCACAGGAGTCCATGACACTGTCGTCAACCAA 1809878 Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698 | ||||| ||| | ||||| || | || ||||| || || ||||| ||||| ||||| Sbjct 1809879 TTGCTGTCCAAAATTGACGGGGTAGAACAGCTGAACAACATCTTAGTCATTGGAATGACC 1809938 Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758 ||||||| || | ||||| || | | ||| | || | ||||| | || || Sbjct 1809939 AATAGACCAGATCTGATAGATGAAGCTCTCCTTCGATCTGGAAGACTGGAAGTTAAAATG 1809998 Query 19759 GAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACC 19818 |||| |||||| |||||| || || | |||| | |||| || ||| ||| Sbjct 1809999 AAAATAGGCTTACCAGATGAAAAAGGTCGACTACAAATCCTTCACATCCACACAGCAAGG 1810058 Query 19819 ATGCGACAAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACC 19878 ||| || || | | | || || |||||| | ||||| | || | | ||| Sbjct 1810059 ATGAGAGGGCATCAGTTACTCTCTGCAGACGTAGATATTAAAGAACTGGCCACAGAGACC 1810118 Query 19879 AAAAACTATAGCGGCGCAGAACTTGAGGGATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 || || | || || || ||| | ||||| | ||| | || || ||||| | ||| ||| Sbjct 1810119 AAGAATTTCAGTGGTGCTGAATTGGAGGGTCTGGTGTGAGCGGCACAATCCACTGCTATG 1810178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 19540 AAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT 19599 || ||| ||||||||| || || | |||||| | || || ||||| ||||| ||||| Sbjct 1521161 AACAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGAGGG 1521102 Query 19600 T------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653 ||||| | ||||| ||||||||||| ||||||||| | ||||| ||| | Sbjct 1521101 AGCATGGCTGGTAGCACGGGAGTCCATGACACTGTCGTCAATCAATTGCTGTCCAAAATT 1521042 Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATG 19695 ||||| || | || ||||| || || ||||| ||||| ||| Sbjct 1521041 GACGGGGTAGAACAGCTGAACAACATCTTAGTCATTGGTATG 1521000 >seq6871 Length=4006375 Score = 125 bits (138), Expect = 6e-24 Identities = 241/351 (69%), Gaps = 11/351 (3%) Strand=Plus/Plus Query 77341 GTCCAGCTTCATAAAGTCATCCTTGTTGACAACTGACCCTCCGCCATGCAGCCTCCAGCC 77400 |||||||| ||| ||||| ||||||||| || | | ||| | | |||||| || Sbjct 2981533 GTCCAGCTCCATGAAGTCCTCCTTGTTGGTCACCGCCTTCCCGGCGCTCGTCCTCCATCC 2981592 Query 77401 GTTCTGCTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACATGCTGTCTGT 77460 ||||| ||||||| || ||||| | || | ||||||||||| |||||||||||||| Sbjct 2981593 GTTCTCCTTCCAGCCCTGGACCCAGCTGGTGATGCCATTGATGGTAAACATGCTGTCTGT 2981652 Query 77461 GTAGACGACCAGCTTCTTGAT-TTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGGATGCAG 77519 ||| | ||||||||| |||| || | |||| ||||| | | ||| ||||| Sbjct 2981653 GTACAGAACCAGCTTCGTGATGTTCGGAGCCCTG-GCTTGCTCTATGGCT-----TGCAG 2981706 Query 77520 CCTGGATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACATTAAGCG 77579 || ||||| || | |||||||||||| |||| ||||| | ||||| | | Sbjct 2981707 GGTGAATTTCTGCTCTTTGGTTTGTCTGTCGCCCAGGAAGTCTAATGCCCACATTGAAAG 2981766 Query 77580 GGTGATTATAACCCCAATATACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTT--TGA 77637 |||| ||||| || | ||| ||||| || ||||| | | || || || Sbjct 2981767 GGTGGCCGGGCCCCCAGTACATGCCGATGCCCGCGCGGGCCCTCTGGCGCCCATTGCTGC 2981826 Query 77638 TAAGCAACAGCCGTCAGTGTAGACCACCACGGCGTCACCCATGTACGTGAA 77688 | ||| |||||||| |||||||| || || || |||||||| | ||| Sbjct 2981827 T--GCAGCAGCCGTCTGTGTAGACGACGACATATTCGCCCATGTAAGAGAA 2981875 >seq7184 Length=5150663 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || ||||| | ||| ||||| |||||||| ||||| || ||||| || ||||| ||| Sbjct 2936482 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGCTCATTTGCTGCTATATTCTGG 2936541 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 ||||||||| ||||| |||||||||| | || ||||| ||||| | || || | ||| Sbjct 2936542 TTAAAGAAAAGAGGTCTGATGCCTGGACTCACCTTTTCCAATGAACTCATCAGCAGAGAT 2936601 Query 44255 GAAG 44258 |||| Sbjct 2936602 GAAG 2936605 Score = 89.7 bits (98), Expect = 4e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 2943139 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 2943198 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| ||| |||||||| Sbjct 2943199 AACGAGTTTCAGAGTATCAGCG 2943220 >seq18010 Length=2831715 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 |||| || || | || ||| | || || ||| || || ||||| |||||| | Sbjct 1770957 TGGCCTTCTTAGTCGCCAGCCATGGCATCACCAAGGAGAACTTGGTGGAGCGGTTTAGCC 1771016 Query 43914 AAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||||| || ||| |||| | ||||| || | || ||||||||||| ||||| Sbjct 1771017 AAGAAGTTCAGATCACC-GAAGGCTGCTGTTTCTACAGCTTCCAAATTGCCATGGAAAAC 1771075 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATG 44021 || ||||| |||||||||||||| || || || || |||| ||||||| Sbjct 1771076 ATCCATTCTGAAATGTACAGTCTCCTCATTGACACTGACATTAAAGATG 1771124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396963031472845