Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq10844 96.9 3e-15 seq7603 87.8 2e-12 seq12718 84.2 2e-11 seq9940 82.4 6e-11 >seq10844 Length=7385475 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || | || || ||||| |||||||||||||| | |||| | Sbjct 3309424 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGACCA 3309365 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || |||||||| || || |||| |||||||| || || || || | ||||| || Sbjct 3309364 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 3309305 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| || ||| | | || | ||||| ||| ||||| || || || || Sbjct 3309304 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 3309245 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | ||||| ||||| || ||||||||||| ||||| |||| Sbjct 3309244 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 3309204 >seq7603 Length=6857920 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || | | || ||||| |||||||||||||| | || | | Sbjct 2062659 CGCAGCACCAAGTGCAGGATGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGTGACCA 2062718 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || |||||||| || || |||| |||||||| || || || || | ||||| || Sbjct 2062719 TCCTCTAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 2062778 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| || ||| | | || | ||||| ||| ||||| || || || || Sbjct 2062779 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 2062838 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | ||||| ||||| || ||||||||||| ||||| |||| Sbjct 2062839 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 2062879 >seq12718 Length=1038120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || | || || ||||| | |||||||||||| | |||| | Sbjct 56369 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTAAATATTGTAGTCTGAGAGAGTGCGACCA 56310 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || |||||||| || || |||| |||||||| || | || || | || || || Sbjct 56309 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTTAGGTGGGATGCCGTCCTTG 56250 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| || ||| | | || | ||||| ||| ||||| || || || || Sbjct 56249 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 56190 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | ||||| ||||| || ||||||||||| ||||| |||| Sbjct 56189 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 56149 >seq9940 Length=104459 Score = 82.4 bits (90), Expect = 6e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 131030 GCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTT 131089 ||||| || ||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 55172 GCCAGATCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 55113 Query 131090 AATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGA 131149 ||| | || | ||||| ||||| | |||| | ||||||||| ||||| ||| Sbjct 55112 AATAACTGGGCCTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAGA 55053 Query 131150 CCCTGTATCCCAA 131162 || |||| ||||| Sbjct 55052 CCTTGTACCCCAA 55040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424407349747128