Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq13404 141 1e-28 >seq13404 Length=4903880 Score = 141 bits (156), Expect = 1e-28 Identities = 275/399 (69%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742 ||||||| |||||||| || || ||||| || ||| | || ||||| || || ||||| Sbjct 40371 GAAGAGGCAGAGTTTCCAATAGCATACTCCATAGTGGTTCATCACAAAATTGAAATGTTT 40430 Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802 || | |||||||||||||||||| || ||||| |||| || | || |||||| Sbjct 40431 GACAGGCTCCTGAGGGCCATCTACATGCCTCAGAATTTCTATTGTATTCATGTGGACAAG 40490 Query 13803 AAGTCCGGCGACGAGTTCAT--CCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACG 13860 || || | || ||| | ||| || | || | || || || ||| ||||| Sbjct 40491 AAATCGGAGGATTCCTTCCTGGCCGCGGTGACTGGT--ATTGCATCCTGTTTCAGTAACG 40548 Query 13861 TGGCCCTGGCCCACCGGCTGCACGAC-GTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCC 13919 | ||||| | |||| | ||| |||||||||| || |||||||| || |||||| Sbjct 40549 TCTTTGTGGCCAGTCAGCTGGA-GACTGTGGTGTACGCATCGTGGAGTCGGGTCCAGGCC 40607 Query 13920 GACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAG-TGGAGGTACCTGCTCAA 13978 ||||||| ||| ||| |||||| || || || | |||| ||||||| |||| Sbjct 40608 GACCTCAACTGTATGCGGGACCTCCACAAAAGAAACG-CAGGCTGGAAGTACCTGATCAA 40666 Query 13979 CCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGC 14038 ||| ||||| ||||| || || | || ||||||||||| || || || ||| ||| | Sbjct 40667 CCTTTGCGGCATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGAAGCTCAAGTC 40726 Query 14039 CCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCC 14077 || || | ||| ||| |||| ||| | ||||| Sbjct 40727 ACTAATGGGAGAAAACAACCTAGAGACGGAGAGAATGCC 40765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657901209629440