Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq10844 113 3e-20 seq7603 100 2e-16 seq18775 93.3 3e-14 seq18779 84.2 1e-11 >seq10844 Length=7385475 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| |||||| || || ||| ||| || ||||| || || ||||| Sbjct 3309437 GCCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 3309378 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || ||||| || ||||| || | |||||| ||||| || || Sbjct 3309377 GAGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 3309318 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | ||| || | ||| ||||| | ||| | Sbjct 3309317 GATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAA 3309259 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || | || |||||||| |||||||| Sbjct 3309258 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3309210 >seq7603 Length=6857920 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| |||||| || || || ||| || ||||| || || ||||| Sbjct 2062646 GCCACCCCTGAGACGCAGCACCAAGTGCAGGATGGACTCTTTCTGAATATTGTAGTCTGA 2062705 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || | | || || || ||||| || || || || | |||||| ||||| || || Sbjct 2062706 GAGAGTGTGACCATCCTCTAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGTGG 2062765 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | ||| || | ||| ||||| | ||| | Sbjct 2062766 GATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAA 2062824 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || | || |||||||| |||||||| Sbjct 2062825 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2062873 >seq18775 Length=3279689 Score = 93.3 bits (102), Expect = 3e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 34483 CCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGT 34542 || || ||||| | || ||| || || ||| ||| | ||||| || || ||||| || Sbjct 1065736 CCCCTGAGACGAAGCATCAAGTGCAGGGTGGACTCTTCCTGAATATTGTAGTCTGAGAGA 1065677 Query 34543 GTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACT 34602 || | | || || || ||||| || ||||| || | |||||| ||||| || || | Sbjct 1065676 GTGTGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATG 1065617 Query 34603 CCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATT-GTGTCTTCGCTCTCCACTTC 34661 |||||||||||| ||| ||| | ||| || | ||| ||||| | ||| || || Sbjct 1065616 CCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCATTGGTGTCACTGGGCTCAACCTC 1065558 Query 34662 CACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||| || || || || || | || |||||||| |||||||| Sbjct 1065557 AAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 1065513 >seq18779 Length=146304 Score = 84.2 bits (92), Expect = 1e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551 |||||||| | |||||||||| ||||||||||||||| || || || || || || | Sbjct 86547 CGCAACACAACATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGAGTACGTCTG 86606 Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 ||||| ||||| || | | ||| || || | || || || || || ||||| ||||| Sbjct 86607 TCTTCCAGTTGCTTGTCAGTAAAGATCAATCTTTGCTGATCAGGAGGAACTCCTTCCTTA 86666 Query 34612 TCTGTGATCTT 34622 || |||||| Sbjct 86667 TCCTGGATCTT 86677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314339237828177