Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13340 113 4e-20 seq9191 113 4e-20 seq101769 105 6e-18 seq19127 96.9 3e-15 seq5424 86.0 5e-12 >seq13340 Length=2707246 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || || Sbjct 1286842 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1286783 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || ||||||||||| ||||| || || || || Sbjct 1286782 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1286723 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||||||| | ||| | ||||| |||||| Sbjct 1286722 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCTTGTCCGACTACAAC 1286663 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || ||||| || | || |||| |||| ||| | || || Sbjct 1286662 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGAGGGGG 1286616 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || || Sbjct 1287070 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287011 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || ||||||||||| ||||| || || || || Sbjct 1287010 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1286951 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||||||| | ||| | ||||| |||||| Sbjct 1286950 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1286891 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || |||| |||| || | ||||| || Sbjct 1286890 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGGGAT 1286841 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || || Sbjct 1287298 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287239 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || ||||||||||| ||||| || || || || Sbjct 1287238 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287179 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||||||| | ||| | ||||| |||||| Sbjct 1287178 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287119 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || |||| |||| || | ||||| || Sbjct 1287118 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGGGAT 1287069 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || || Sbjct 1287526 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287467 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || ||||||||||| ||||| || || || || Sbjct 1287466 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287407 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||||||| | ||| | ||||| |||||| Sbjct 1287406 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287347 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || |||| |||| || | ||||| || Sbjct 1287346 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGGGAT 1287297 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || || Sbjct 1287754 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287695 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || ||||||||||| ||||| || || || || Sbjct 1287694 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287635 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||||||| | ||| | ||||| |||||| Sbjct 1287634 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287575 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || |||| |||| || | ||||| || Sbjct 1287574 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGGGAT 1287525 >seq9191 Length=3706871 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| | || || || || || ||||| Sbjct 2451252 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCGGT 2451311 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | | ||||| |||||| ||||| |||||| || ||||| || ||||| || Sbjct 2451312 GACACCACTGAGAGTGTCAAAGCTAAAATCCAAGACCGGGAGGGCATCCCGCCCGACCAG 2451371 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG-ACCGTTTCCGATTACAA 27166 ||||| | || | ||||||||||| ||| ||| | || || | || || ||||| Sbjct 2451372 CAGCGCCTGATTTTTGCCGGCAAACAGCTGG-AGAATGGCCGCACTCTCTCAGACTACAA 2451430 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | || ||||| ||| |||| || ||||| Sbjct 2451431 TATTCAGAAAGAGTCCACCCTGCACTTGGTGCCTCGTCTGCGTGGGGGCAT 2451481 >seq101769 Length=1662402 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 33383 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 33324 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || || || || || || |||||||| || ||||| || Sbjct 33323 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCAG 33264 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| ||||||||| Sbjct 33263 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 33204 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || || ||||| ||| | || |||| | ||| || |||||||| Sbjct 33203 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 33156 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 33611 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 33552 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || || || || || || |||||||| || ||||| || Sbjct 33551 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCAG 33492 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| || |||||| Sbjct 33491 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 33432 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| ||| | || |||| |||| || ||||||| || Sbjct 33431 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGTAT 33382 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||||||||||| | || || || || ||||| || Sbjct 33839 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 33780 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || || |||||||| || || || || Sbjct 33779 GACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCAG 33720 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| ||||||||| Sbjct 33719 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 33660 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| ||| | || |||| |||| || ||||||| || Sbjct 33659 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGTAT 33610 >seq19127 Length=6355749 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/230 (69%), Gaps = 11/230 (5%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || |||||||| || ||| | || || || || || || || Sbjct 5647559 ATGCAGATCTTTGTGAAGACTCTGACTGGGAAGACCATCACCCTCGAGGTTGAGCCC--- 5647503 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||||| ||||| ||| | |||||||| || ||||| || || | ||| Sbjct 5647502 ------ATTGAGAATATCAAAAGCAAAGTCCAAGACAAGGAGGGCATCCCGCCTGCCCAA 5647449 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | | ||||||||| |||| || | | || |||| || |||||| Sbjct 5647448 CAGCGCCTGATTTTTGTGGGCAAACAACTGGAGGATGGCTGCACTCTTTCAGACTACAAC 5647389 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| | |||| ||| |||| ||||| | || | | ||||||||| Sbjct 5647388 ATTCAGA--GAGTATACCCTACACTTGGTGCTTTGTCTACAGGGTGGCAT 5647341 >seq5424 Length=3103736 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/228 (69%), Gaps = 9/228 (4%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||| ||||| || || || ||| | || || ||||| || || Sbjct 2558820 ATGCAGATTTTTGAGAAAACCCTTACGGGGAAGACCATCACGGTTGAA------CCCTCG 2558767 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || || || || || ||||| || |||||||| || || || ||||| Sbjct 2558766 GATACAATAGAAATTGTAAAGGCCAAGATTCAGGATAAAGAAGGAATTCCTCCTGATCAG 2558707 Query 27108 CAGCGTTTAATATAC-GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || | | | ||| || ||||| ||| || ||||||| || |||| || ||||| Sbjct 2558706 CAAAGACTGACCTACTGCTGGCAAGCAACTGTAAGACAGAAGTACTCTTTCTGACTACAA 2558647 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||||||||||| || | ||| | || ||| | | || ||||| Sbjct 2558646 CATTCAAAAGGAGTCCAC--TCCATCTTGTGTTGAGACTTCGTGGTGG 2558601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434365134866880