Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq18467 306 3e-78 seq8166 159 3e-34 >seq18467 Length=3096793 Score = 306 bits (338), Expect = 3e-78 Identities = 516/748 (69%), Gaps = 22/748 (3%) Strand=Plus/Plus Query 6433 GTACCCTTCCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCTCGAAT 6492 |||||| || | | ||||| || || | ||||||||||||| || || || Sbjct 1468559 GTACCCCTCAATCTGAAAGTCTTCAGTCTTGAAGTCATCGATTGTCTCAACTTTTCAAAG 1468618 Query 6493 AATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGAT 6552 |||||||||| ||||| || || |||||||| ||||| || ||| |||| | Sbjct 1468619 GATTTTGAGCTTCGGGAAAGGCTTCGGTTCTCGTTGAAGCTGCATTTTCAGCGGCTCAAC 1468678 Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC 6612 ||| |||| |||||| || ||||| ||||| || |||| | || || || || || Sbjct 1468679 GTGATTCAAGTAGATGTGTGCATCTCCCAAAGTGTGCAGGAAGTCACCTGGCTTCAGGCC 1468738 Query 6613 CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCC 6672 || || |||| |||||| |||||||| | ||| || || |||||||| ||||| || Sbjct 1468739 GGTGATGTGTGCGACCATGTAGGTGAGCAGGGTGTAGCTGGCGATGTTGAAGGGCACACC 1468798 Query 6673 TAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTA 6732 || |||||||||| | || | || || |||||||||||||| || || ||| | ||||| Sbjct 1468799 TAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGGTCACCGTTCACCACGTA 1468858 Query 6733 GAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCA 6792 ||| || ||||||| ||||| || || || ||||| ||| ||||| || || ||||| Sbjct 1468859 GAACTGACAGAGGGCATGGCATGGAGGCAGGGCCATTGAAGGAAGATCGTTTGGATTCCA 1468918 Query 6793 CGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTG 6852 || |||| | ||| |||||||| |||||||| || | ||| | ||||| | || Sbjct 1468919 AGCACACAGGATGATTCTTCTGTCGTCAGGGTTGGTTTTGATTGTGCCAATCACCTTTTG 1468978 Query 6853 CAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAA 6912 ||| |||| ||||| || | ||||| || | || | | || || |||||||| Sbjct 1468979 CAGTCGGTCTGCTCCTTGATCGGAATAATCTGAATCCATATCTTTGTAGTCTGCCCCAAA 1469038 Query 6913 GTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG-GAACC 6971 || |||||||| || || || || ||||| || | || || | ||| ||| | Sbjct 1469039 ATGCCTCCACTGAAAGCCATAAACGGGGCCTAAAT----CTTCTTTTATGCTGGAGAATC 1469094 Query 6972 CCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG 7031 || || || | || | ||||||||||| | || ||| ||||| Sbjct 1469095 CC-------------AGGCT----ATCCATTGGCGTCCCAGATTCTTACTCCCTTGGACG 1469137 Query 7032 AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCT 7091 | || || || | || |||| ||| | | |||||||||| || | | | || |||| Sbjct 1469138 ACAGTTCTTTAGCATTTGTGGATCCCTTGATAAACCACAGCAACTGCCCCAGGACACCCT 1469197 Query 7092 TCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGGCCT 7151 ||||| ||||| | || || |||||||| ||||| || | ||| |||| || |||| Sbjct 1469198 TCCAGAACACATGCTTGGTTGTCAGCAGAGGAAACTCATGTCTCAGGCTGTAGCGCGCCT 1469257 Query 7152 GTGTGCCGAACACGGAGAGGGTCCCCGT 7179 | |||||||||| || ||||| || || Sbjct 1469258 GCATGCCGAACACCGACAGGGTGCCGGT 1469285 Score = 306 bits (338), Expect = 3e-78 Identities = 516/748 (69%), Gaps = 22/748 (3%) Strand=Plus/Minus Query 34166 ACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTTCGGGGCGAATTTCCG 34225 || || ||||| || |||||||||| ||||| || |||| ||| | || ||||| Sbjct 1469285 ACCGGCACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTGAGACATGAGTTTCCT 1469226 Query 34226 CTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTG 34285 |||||||| || || | ||||| ||||||||| || | | | || |||||||||| | Sbjct 1469225 CTGCTGACAACCAAGCATGTGTTCTGGAAGGGTGTCCTGGGGCAGTTGCTGTGGTTTATC 1469166 Query 34286 AGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCAC 34345 | ||| |||| || | || || || |||||| ||| || | ||||||||||| | Sbjct 1469165 AAGGGATCCACAAATGCTAAAGAACTGTCGTCCAAGGGAGTAAGAATCTGGGACGCCAAT 1469106 Query 34346 GGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGG 34404 || | || || ||| ||| ||| | || || | || || Sbjct 1469105 GGAT----AGCCT-------------GGGATTCTCCAGCATAAAAGAAG----ATTTAGG 1469067 Query 34405 CCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGA 34464 ||| || || || || |||||||| || |||||||| || || | | || | || Sbjct 1469066 CCCCGTTTATGGCTTTCAGTGGAGGCATTTTGGGGCAGACTACAAAGATATGGATTCAGA 1469007 Query 34465 CTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCC 34524 ||||| | || ||||| |||| ||||| | ||||| | ||| | || ||||| Sbjct 1469006 TTATTCCGATCAAGGAGCAGACCGACTGCAAAAGGTGATTGGCACAATCAAAACCAACCC 1468947 Query 34525 TGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCT 34584 ||| |||||||| ||| | |||| || ||||| || || ||||| ||| ||||| || Sbjct 1468946 TGACGACAGAAGAATCATCCTGTGTGCTTGGAATCCAAACGATCTTCCTTCAATGGCCCT 1468887 Query 34585 CCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCT 34644 || || ||||| ||||||| || |||||||| | ||| || || |||||||||||||| Sbjct 1468886 GCCTCCATGCCATGCCCTCTGTCAGTTCTACGTGGTGAACGGTGACCTGTCCTGCCAGCT 1468827 Query 34645 CTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCT 34704 || || | || | |||||||||| |||| ||||| |||||||| || || ||| | || Sbjct 1468826 GTACCAGAGGTCAGCAGACATGGGGCTAGGTGTGCCCTTCAACATCGCCAGCTACACCCT 1468767 Query 34705 GCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTT 34764 |||||| |||||| |||| || || || || || || || | |||| || || Sbjct 1468766 GCTCACCTACATGGTCGCACACATCACCGGCCTGAAGCCAGGTGACTTCCTGCACACTTT 1468707 Query 34765 GGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGA 34824 ||| ||||| || |||||| |||| ||| | |||| ||| || ||||| |||||||| Sbjct 1468706 GGGAGATGCACACATCTACTTGAATCACGTTGAGCCGCTGAAAATGCAGCTTCAACGAGA 1468647 Query 34825 GCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAGCCGTCACCTCAATCGATGACTTTAG 34884 || || ||||| |||||||||| || || || ||||||||||||| | Sbjct 1468646 ACCGAAGCCTTTCCCGAAGCTCAAAATCCTTTGAAAAGTTGAGACAATCGATGACTTCAA 1468587 Query 34885 GAGCGAGGACTTCGTGTTGGAAGGGTAC 34912 || || ||||| | | || |||||| Sbjct 1468586 GACTGAAGACTTTCAGATTGAGGGGTAC 1468559 >seq8166 Length=12950751 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || |||||||| ||||| |||| |||| Sbjct 4309637 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCTAGCCCC 4309696 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | || | || || ||||||||||||||||| || ||| | |||||||| ||| Sbjct 4309697 ATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 4309756 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||||| ||||| || |||||| ||| ||||| Sbjct 4309757 CAGAGGGCATGGCATGGGGGCAGGGCCATCGAAGGAAGATC 4309797 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||| |||||| || ||||| ||||| |||||||||| |||||||| | ||| Sbjct 4309797 GATCTTCCTTCGATGGCCCTGCCCCCATGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 4309738 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || | || | |||||||||| |||| ||||| ||| Sbjct 4309737 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGCAGACATGGGGCTAGGTGTGCCCTTC 4309678 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 4309677 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 4309637 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || |||||||| || || || || ||||| || || || || | Sbjct 4311854 TAGTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATCTCCTTCTTTT 4311913 Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | ||| ||| ||| | ||||||| ||||| || ||||| | ||||||||||| | Sbjct 4311914 CT-GCTGGAGAATCCCAGGCTGTCCAGGAAGTCACGGGACCCATTGGCGTCCCAGATTCT 4311972 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 ||| ||| |||||| || || || | || |||| Sbjct 4311973 CACTCCCTTGGACGACAGTTCTTTAGCATTGGTGG 4312007 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| || | || || || |||||| ||| |||| ||||||||||| | ||||| | Sbjct 4312007 CCACCAATGCTAAAGAACTGTCGTCCAAGGGAGTGAGAATCTGGGACGCCAATGGGTCCC 4311948 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTC 34411 | ||||| ||||||| | ||| ||| ||| | | | || || || || ||||| || Sbjct 4311947 GTGACTTCCTGGACAGCCTGGGATTCTCCAGC-AGAAAAGAAGGAGATTTAGGCCCCGTT 4311889 Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || || |||||||| || |||||||| || || Sbjct 4311888 TATGGCTTTCAGTGGAGGCATTTTGGGGCAGACTA 4311854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447692159797680