Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq18467 250 2e-61 seq8166 165 7e-36 seq18455 87.8 1e-12 >seq18467 Length=3096793 Score = 250 bits (276), Expect = 2e-61 Identities = 446/653 (68%), Gaps = 31/653 (5%) Strand=Plus/Plus Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670 |||||||| | | || || | | ||||| || ||||||| || ||||| | | ||| Sbjct 1468632 GGGAAAGGCT-TCGGTTCTCGTTGAAGCTGCATTTTCAGCGGCTCAACGTGATTCAAGTA 1468690 Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29730 || ||| |||||||||| ||||| | || || || || | || ||||||| ||| || Sbjct 1468691 GATGTGTGCATCTCCCAAAGTGTGCAGGAAGTCACCTGGCTTCAGGCCGGTGATGTGTGC 1468750 Query 29731 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC 29790 | |||||| ||||| || | ||||||||||||||| |||||||| || ||||||||||| Sbjct 1468751 GACCATGTAGGTGAGCAGGGTGTAGCTGGCGATGTTGAAGGGCACACCTAGCCCCATGTC 1468810 Query 29791 CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACAT 29850 ||||||||||||| |||||||| || || || |||| |||||| |||||||| | Sbjct 1468811 TGCTGACCTCTGGTACAGCTGGCAGGACAGGTCACCGTTCACCACGTAGAACTGACAGAG 1468870 Query 29851 GGCATGGCACGGAGGAAGGGCCATGAGACCCAAG-TCTTTGGGGTTCCAGGCACACACGA 29909 ||||||||| ||||| |||||||| || ||| || || || ||||| ||||||| || Sbjct 1468871 GGCATGGCATGGAGGCAGGGCCAT-TGAAGGAAGATCGTTTGGATTCCAAGCACACAGGA 1468929 Query 29910 TGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCA 29969 |||| | ||||| || |||||| | |||| | | | | |||||||| | || Sbjct 1468930 TGATTCTTCTGTCGTCAGGGTTGGTTTTGATTGTGCCAATCACCTTTTGCAGTCGGTCTG 1468989 Query 29970 CCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACT 30029 | || | || || |||| | ||||||||||||| Sbjct 1468990 CTCCTTGATCGGAATAATCTGAATCCATATCTTTGTAGTCTGCCCCAAAATGCCTCCACT 1469049 Query 30030 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTCTTGTCC 30088 | || || || || || || | ||| |||| | |||| || | ||| Sbjct 1469050 GAAAGCCATAAACGGGGCCTAAATCT---TCTT--TTATGCTGGAGAATCCC-------- 1469096 Query 30089 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 30148 || || | || |||||||||||||| |||| ||||| || || ||||| Sbjct 1469097 ----AGGCT----ATCCATTGGCGTCCCAGATTCTTACTCCCTTGGACGACAGTTCTTTA 1469148 Query 30149 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 30208 | |||||||| || ||| |||||||||| || | ||| ||| ||||||| || || Sbjct 1469149 GCATTTGTGGATCCCTTGATAAACCACAGCAACTGCCCCAGGACACCCTTCCAGAACACA 1469208 Query 30209 CTCTTGGTCGTGAGGAGGGGAAAC---TGTCCCTTGAGGCCGTACCTCGCCTG 30258 |||||| || || || |||||| |||| | |||| ||| | |||||| Sbjct 1469209 TGCTTGGTTGTCAGCAGAGGAAACTCATGTC---TCAGGCTGTAGCGCGCCTG 1469258 >seq8166 Length=12950751 Score = 165 bits (182), Expect = 7e-36 Identities = 133/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || ||||||| ||| || |||||||| ||||| || | ||||||||||||||| |||||| Sbjct 4309625 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 4309684 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || ||||||||||| ||||||||||||| |||||||| || ||||| |||| | Sbjct 4309685 ACACCTAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 4309744 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 ||||| ||||| || | ||||||||| || || |||||||| Sbjct 4309745 ACGTAGAACTGGCAGAGGGCATGGCATGGGGGCAGGGCCAT 4309785 >seq18455 Length=17742090 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || || || || ||||| |||| || | |||||| | | ||| | |||||| | ||| Sbjct 6154911 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGATTCTTCTTGGGA 6154970 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| ||||| |||||||| ||||||| ||||| |||||| Sbjct 6154971 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 6155018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405659431848334