Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2520 100 2e-16 seq18010 86.0 5e-12 seq7184 86.0 5e-12 >seq2520 Length=8653699 Score = 100 bits (110), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 31775 AAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCT 31834 ||||| || ||||| | || | ||||| |||||||| | | || |||||| | || Sbjct 1838028 AAAACTGACATTCAGGTAGCTCTTCCTTCTGGGTGCTATGAA-GAGGAGCTCCACGTTCC 1838086 Query 31835 GGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGA 31894 | ||||| | ||||||||||| || || || || |||||||||||| ||| |||||| Sbjct 1838087 AGCTTGGCTGCAAAACACTTTATAGATGTAGGAGCTGGTGTTATAGATGAAGATTATAGA 1838146 Query 31895 GGAAACGTTGGAATTGTGTTGTTTAATTTTGG 31926 ||||| |||| |||| | ||||||||||| Sbjct 1838147 GGAAATCTTGGTGTTGTACTATTTAATTTTGG 1838178 >seq18010 Length=2831715 Score = 86.0 bits (94), Expect = 5e-12 Identities = 302/467 (65%), Gaps = 20/467 (4%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| || || |||||||| || ||||||| | |||||| ||| || || | | Sbjct 1771374 CAGGCAAAGTCTCAGTGCAAACCCTCTTCTCTGCCACTCAGTTGGTTGGAGAATG--AGG 1771317 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || | || | ||| || || ||||| ||||| | ||||| |||| Sbjct 1771316 CCAGTCACCAGGTCTCATTTCTTGAGCCAGAATATCGGCGCAAA-----------AGAAG 1771268 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727 || ||||| || || |||| |||| | || || | | | ||||||| | Sbjct 1771267 ATTCCTTCCACTGCCTTAAACCCTACAACACGTTCTCCATAGGCGGCCTCTTTGTCCCTG 1771208 Query 4728 ATCCATTTTAATGCCCAGTTAG-CTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 ||||| || |||||| || || ||||| | || || || || | | ||||| Sbjct 1771207 ATCCAACGCAAGGCCCAGCCAGGCTGCCTTCTTGGCACAAGGCATCGTCTCCACGGCGTT 1771148 Query 4787 AAATAATTTACTTT-TTTCAAATGGG--TCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || | ||| |||| |||| |||| ||| | |||||| || || || || || Sbjct 1771147 GAAGAGCA-ACTCCCTTTCC--TGGGCATCTTTAATGTCAGTGTCAATGAGGAGACTGTA 1771091 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 |||||||||||| || ||||| || ||||| || || | ||| || || | |||| || Sbjct 1771090 CATTTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCTGTAGAAACAGCAGCCTTCGGT 1771031 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | |||||||| | | ||| | || || ||||| || || || || | ||||| Sbjct 1771030 GATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTCTCCTTGGTGATGCCATGGCTGGC 1770971 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCT 5010 | || || |||| || || || || |||| | ||| || |||| Sbjct 1770970 GACTAAGAAGGCCAGCACGTGCGAAATGAAGTGCCTTTCCTCGGGCT 1770924 >seq7184 Length=5150663 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || || || ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 2943217 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 2943158 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 2943157 ATAAAATCAAAGGGATT 2943141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| || ||||| || ||||||||||||||||| || || | Sbjct 2931623 AAAATCTT---ACCAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAAGGCTAAGA 2931567 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 || || ||||| |||| || || | ||||| || | |||||| || | ||| || | Sbjct 2931566 TGTGGGAGATAAAATACTTCTCTTCTGATTTAAGCTTGTGCCAGTGTGGGAGATCCTTTG 2931507 Query 5041 TTAAATCAAC 5050 ||| ||||| Sbjct 2931506 ATAAGTCAAC 2931497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426519926244077