Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq18467 253 2e-62 seq8166 132 4e-26 >seq18467 Length=3096793 Score = 253 bits (280), Expect = 2e-62 Identities = 463/671 (69%), Gaps = 33/671 (5%) Strand=Plus/Plus Query 27105 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 27164 |||||||| | | || || | | ||||| | |||||||| || ||||||| || ||| Sbjct 1468632 GGGAAAGGCT-TCGGTTCTCGTTGAAGCTGCATTTTCAGCGGCTCAACGTGATTCAAGTA 1468690 Query 27165 GACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224 || ||| || ||||||| ||||| | || || || || | || ||||||| ||| || Sbjct 1468691 GATGTGTGCATCTCCCAAAGTGTGCAGGAAGTCACCTGGCTTCAGGCCGGTGATGTGTGC 1468750 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 | |||||| ||||| || | ||||||||||||||| ||||| || || ||||||||||| Sbjct 1468751 GACCATGTAGGTGAGCAGGGTGTAGCTGGCGATGTTGAAGGGCACACCTAGCCCCATGTC 1468810 Query 27285 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATAT 27344 | ||||||||||| ||||| || || || || || | ||||| |||||||| | Sbjct 1468811 TGCTGACCTCTGGTACAGCTGGCAGGACAGGTCACCGTTCACCACGTAGAACTGACAGAG 1468870 Query 27345 GGCGTGGCACGGAGGAAGAGCCA-TGAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACACG 27402 ||| ||||| ||||| || |||| ||| | ||| || || || ||||| || |||| | Sbjct 1468871 GGCATGGCATGGAGGCAGGGCCATTGAAG--GAAGATCGTTTGGATTCCAAGCACACAGG 1468928 Query 27403 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCC 27462 ||||| | ||||| || |||||| | |||| | | | | |||||||| | || Sbjct 1468929 ATGATTCTTCTGTCGTCAGGGTTGGTTTTGATTGTGCCAATCACCTTTTGCAGTCGGTCT 1468988 Query 27463 ACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAT 27522 | || | || || ||| ||| || |||| ||||| || ||||||||||| Sbjct 1468989 GCTCCTTGATCGGAATAATCTGAATCCATATCTTTGTAGTCTGCCCCAAAATGCCTCCAC 1469048 Query 27523 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-AGCCCCTCTTGTC 27581 || || || || || || || | ||| |||| | |||| || | ||| Sbjct 1469049 TGAAAGCCATAAACGGGGCCTAAATCT---TCTT--TTATGCTGGAGAATCCC------- 1469096 Query 27582 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTT 27641 || || | || |||||||||||||| |||| ||||| || || ||||| Sbjct 1469097 -----AGGCT----ATCCATTGGCGTCCCAGATTCTTACTCCCTTGGACGACAGTTCTTT 1469147 Query 27642 GGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 27701 | |||||||| || ||| |||||||||| || | ||| ||| ||||||| || || Sbjct 1469148 AGCATTTGTGGATCCCTTGATAAACCACAGCAACTGCCCCAGGACACCCTTCCAGAACAC 1469207 Query 27702 CCTCTTGGTCGTGAGGAGGGGAAAC---TGTCCCTTGAGGCCGTACCTGGCCTGAGAACC 27758 |||||| || || || |||||| |||| | |||| ||| | ||||| || Sbjct 1469208 ATGCTTGGTTGTCAGCAGAGGAAACTCATGTC---TCAGGCTGTAGCGCGCCTGCATGCC 1469264 Query 27759 AAACACGGACA 27769 ||||| |||| Sbjct 1469265 GAACACCGACA 1469275 >seq8166 Length=12950751 Score = 132 bits (146), Expect = 4e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || ||||||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 4309625 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 4309684 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || ||||||||||| | ||||||||||| ||||| || || ||||| || | Sbjct 4309685 ACACCTAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 4309744 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 ||||| ||||| || | ||| ||||| || || || ||||| Sbjct 4309745 ACGTAGAACTGGCAGAGGGCATGGCATGGGGGCAGGGCCAT 4309785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369048896640239