Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq9940 132 7e-26 seq2520 86.0 9e-12 >seq9940 Length=104459 Score = 132 bits (146), Expect = 7e-26 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| |||||||||||||| || || |||||||| ||||| | || Sbjct 69209 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 69150 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||| Sbjct 69149 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 69090 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 69089 TTTCTTATACCAT 69077 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| | |||||||| || ||| Sbjct 25730 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 25671 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || || |||||||| || | ||| | ||||||| Sbjct 25670 TATGTTTCAATAGCAGCATCGATATCTTCTTCGTGAATTCCCACAGATACCCTCATCAAC 25611 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 ||||| || ||||||||| || Sbjct 25610 ATATGTTGTGGTCTTTCAGCC 25590 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || || || | || | ||| Sbjct 49819 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 49760 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| || Sbjct 49759 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 49700 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | |||||||||| Sbjct 49699 TCCAGGTAAATAGCAAATGCTCCAGGTCG 49671 >seq2520 Length=8653699 Score = 86.0 bits (94), Expect = 9e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 45892 CCTTGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTTCAGATCAGGAT-AATA 45950 || ||||| | |||||||| |||||| | ||| ||||||| | || |||| || | Sbjct 1838296 CCCTGAGC--CCCTTTCAGTGTCATCTAAAACTTGAACTTCCTCTATTTCTGGATTAAAA 1838239 Query 45951 TATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTATTTCAAATATATCTTT 46010 || |||| | | || || || || |||| ||||| | |||| |||||| | | ||| Sbjct 1838238 AATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATT-TTTACTTCAAAATTTTATTT 1838180 Query 46011 TCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTTCATCTATTACTCCCCC 46070 ||| ||| | || | || |||| | |||||||||||||||||||| || || | Sbjct 1838179 GCCAAAATTAAATAGTACAACACCAAGATTTCCTCTATAATCTTCATCTATAACACCAGC 1838120 Query 46071 TCCCACATCGATA 46083 ||| ||||| ||| Sbjct 1838119 TCCTACATCTATA 1838107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693785103136160