Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq15902 143 4e-29 >seq15902 Length=4918767 Score = 143 bits (158), Expect = 4e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||||| |||| ||| |||||||||||| || || || || ||||| ||||| Sbjct 2303533 GTCTGGAACAACCGCTCATCATCCCATTCTGGATGCTCCTGCTTAAGCACATCACACACT 2303474 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 ||||| ||||| | ||||| || ||||| |||||||| || || || ||||| ||||| Sbjct 2303473 CTGTTATGTTCGCGCAGCCAAATCGTGGCATACATCATCAGACCGGGCACCAGACCAAAC 2303414 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 |||| || || || || | |||| || ||| || || | || || |||||||| | Sbjct 2303413 ACCTCCTGGCCCACGGCAAACCGCAGGTGTTCAGGGACATGAGGTGGGTAGATCATCTCA 2303354 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9479 ||||| |||||||| | ||| ||||| | || || ||||| Sbjct 2303353 GCCTGGGTATCTTTGACTGTGGGAGGATATACCTCTCCATCAAT 2303310 Score = 125 bits (138), Expect = 1e-23 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| ||||||||||||||||| || || |||||| ||| ||| | || Sbjct 2302448 TCTTACCCCATGACCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 2302389 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 |||||| || ||||| || ||| |||| || |||||||| || || |||||||||||||| Sbjct 2302388 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 2302329 Query 9769 GGGAGTGAA 9777 ||| |||| Sbjct 2302328 AGGAATGAA 2302320 Score = 107 bits (118), Expect = 3e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 || || || || ||||| | |||| ||||||||||| | || | |||| ||| Sbjct 2305074 GGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGGAGGCAGTGTTGATGATTTTA 2305015 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||||| || || || || ||||| ||||||||||| || || || || || Sbjct 2305014 AAACCCACTTCACCACCAAAAGTGCTAGGCTTCCAGTAGTGAGGAGAACATATCGGATTG 2304955 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||| || ||||| | ||| || || || || | || | ||| ||||||| |||||| Sbjct 2304954 CCCATCAGTCCTTTCAAGGAAAAGGGGGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 2304895 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 | || || |||| ||| |||| | ||| ||||||||||| || || | ||| Sbjct 2304894 CTATCTGGGCGAGGCTCTTCTACCAGAAGGGCGGGGTACAGCTCCATGGCGTCAATGTCA 2304835 Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 || || || || | || ||||| || ||||| |||||||| Sbjct 2304834 CCATAGAGCGCTTCTAACTCCGCAGCCATTTCCTTCTCTCCTGT 2304791 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | ||||| || || || | || || ||||| ||| ||| | Sbjct 2301854 TCACCTTTCACACCCATGGGAGTCGGGCAGTCATCAGCCACAGGAGGAAGAGCCCTGGTA 2301795 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 |||||||||||||| || || |||||||||||| || |||||| || || || | Sbjct 2301794 TAATAGGAGAGATTCGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTGTGCATTATACGTT 2301735 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || ||||||||||||||||| ||||| |||| Sbjct 2301734 GGTGGGCTGTCAATCAAATCTGATCTGGCTGA 2301703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715964852061760