Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq410 95.1 1e-14 seq115 89.7 5e-13 >seq410 Length=980372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276 |||||| |||| | || || || || ||||| ||||||||||| || ||||| |||| Sbjct 302095 TTTCCTTGGGGTCCTTGATGTAGGTGTCAATGAGGAGGCTGTACATCTCCGAGTGGATGT 302036 Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 |||||||||| || || || ||||| || || ||||| |||| || |||||||| Sbjct 302035 TCTCCATGGCGATTTGGAAGCCGTAGAAACAGCGGGCCTCCGTGATCTGAACTTC 301981 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| |||||||| ||||||||||| || || || | || |||||| ||||| |||| Sbjct 303771 CCTCATCTCTGCTAATAAGTTCGTTGGAGAAGGTGAGGCCAGGCATCAGGCCTCGCTTCT 303712 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| || |||| ||||| || || || ||||| || ||||| || | || |||| Sbjct 303711 TGAGCCAGAAGATCGACGCGAAAGAGCCGGAGAAGAAGATTCCCTCCACTGCGGCGAACG 303652 Query 17106 C 17106 | Sbjct 303651 C 303651 >seq115 Length=3908719 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 16988 TCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTT 17047 || ||||||||||| ||||| || ||||| || | || |||||| |||| ||||||| Sbjct 3778542 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3778483 Query 17048 AACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGC 17106 ||||| ||||| || ||||| || || || ||||| || || || || | ||||| || Sbjct 3778482 AACCAGAATATAGCAGCGAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3778424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517470206544720