Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq30 343 1e-89 seq1364 331 7e-86 seq112 168 5e-37 seq1 118 8e-22 >seq30 Length=9872594 Score = 343 bits (380), Expect = 1e-89 Identities = 423/580 (73%), Gaps = 31/580 (5%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||| | |||||| |||||||||||| ||||||||||||| | ||| Sbjct 1731746 AAAACACCTTCACATTATTCATTCTTTTCATATACTTCATATTTGTACTTAATGCCTTTT 1731687 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||||||||||| |||||| ||| | |||||| |||||||| | | Sbjct 1731686 TCCTCCTGGACATCAGAAAGAACACCTGGATACTCTGGGAGAAGTTTATATTTCTCCAAA 1731627 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||| |||| | || | || ||||| ||||| |||| ||| | | Sbjct 1731626 TCAATTTCTGGGGAAAA------AAATGTA---TCCTGCATCATCCTTGTCAAAAAGAAT 1731576 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 || ||| || | | |||| ||||| ||||| ||| |||| ||||| | |||||| Sbjct 1731575 CTATGATGGCCAAGCTTGTTCATGGCTTCCTTATAAACAAAACTGCCTCCCACTATCCAA 1731516 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 ||||||| |||||||||| ||||||||| | || |||||||||| |||||||| ||| Sbjct 1731515 GCCATGTCCACTTTATTTGTTAATTCTGGTTCCTCAATAAGTTTTAAGGCATCATCCAAA 1731456 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || || || | ||||||||||| | || | || | |||||||| | | Sbjct 1731455 CTTTTGGCAAGAAAATGAGCTCCTTTCAGAGGTTC-----------TACTGAGAACTAAA 1731407 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 ||||| ||| | | |||||||| | |||||| ||||| |||||||| ||||| ||||| Sbjct 1731406 TTAATCCTGTCATGTAAAGGCCAATACTTCTCGGGAATGGAGAACCAGGTCTTCCTACCC 1731347 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 | ||||||||||| || | | ||||| || || |||||||||||||||| Sbjct 1731346 A---------AATTCTGTTTACCTTCTGCTGAAGAGGTTGTGGTCATTCTTTGGAAATAC 1731296 Query 4435 TTAAAATCATTCATAAGTCTTGG--CCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGT 4492 || || ||||| | ||| | || |||||||| || || | |||| |||||||||| Sbjct 1731295 TTGAATTCATTTCTGAGTGTAGGGGCCAAGGCAGGTCTCCATTCTTGCTGATGCCCATGT 1731236 Query 4493 TTTGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 | || | | ||||| ||||||||||| | |||||||| Sbjct 1731235 TCTGGGACATAGCAATGATGCAGTTTAGGGGATGAACCAT 1731196 >seq1364 Length=78148 Score = 331 bits (366), Expect = 7e-86 Identities = 416/575 (72%), Gaps = 31/575 (5%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||| | |||||| |||||||||||| ||||||||||||| | ||| Sbjct 65875 AAAACACCTTCACATTACTCATTCTTTTCATATACTTCATATTTGTACTTAATGCCTTTT 65934 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||||||||||| |||||| ||| | |||||| |||||||| | | Sbjct 65935 TCCTCCTGGACATCAGAAAGAACACCTGGATACTCTGGGAGAAGTTTATATTTCTCCAAA 65994 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||| || ||||| ||||| |||| ||| | | Sbjct 65995 TCAATTTCTGGAAAAAAA-TGTA----------TCCTGCATCATCCTTGTCAAAAAGAAT 66043 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 || ||| || | | |||| ||||| ||||| ||| |||| ||||| | |||||| Sbjct 66044 CTATGATGGCCAAGCTTGTTCATGGCTTCCTTATAAACAAAACTGCCTCCCACTATCCAA 66103 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 ||||||| |||||||||| ||||||||| | || | |||||||| |||||||| | | Sbjct 66104 GCCATGTCCACTTTATTTGTTAATTCTGGTTCCTCAATGAGTTTTAAGGCATCATCCAGA 66163 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || || || | ||||||||||| | || | || | ||| |||| | | Sbjct 66164 CTTTTGGCAAGAAAATGAGCTCCTTTCAGAGGTTC-----------TACTGCGAACTAAA 66212 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 ||||| ||| | | |||||||| | |||||| ||||| |||||||| ||||| ||||| Sbjct 66213 TTAATCCTGTCATGTAAAGGCCAATACTTCTCGGGAATGGAGAACCAGGTCTTCCTACCC 66272 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 | ||||||||||| || | | ||||| || || ||||||||||||||| Sbjct 66273 A---------AATTCTGTTTACCTTCTGCTGAAGAGGTTGTGATCATTCTTTGGAAATAC 66323 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 || || ||||| | ||| |||||||||| || || | |||| ||||||||||| Sbjct 66324 TTGAATTCATTTCTGAGTGGGGGCCAAGGCAGGTCTCCATTCTTGCTGATGCCCATGTTC 66383 Query 4495 TGAGCTACAGCAACAATGCAGTTTAGTGCTTGAAC 4529 || | ||||||| ||||| ||||| | ||||| Sbjct 66384 TGGGACACAGCAATGATGCAATTTAGGGGATGAAC 66418 >seq112 Length=4130070 Score = 168 bits (186), Expect = 5e-37 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26952 ACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAATGAA 27011 |||||||| || || || |||||||| |||||||| || |||||||| |||| || || Sbjct 2870485 ACAATGGGGGTGACACAGGTGCAGCCCACAGTCACGAGTATCTTCTCCAGCCGGAAGGAG 2870426 Query 27012 TTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGACTGAG 27071 | |||||| | || || | |||||| || || ||||| || ||||| ||||| ||| Sbjct 2870425 TGGGGGCAGTGCCGAGGCTCCCTGCGCAAGACCAGGATCTCCTGCTGGATGGGGACGGAG 2870366 Query 27072 TTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTTTGCT 27131 |||| ||||| ||| | ||||| |||| ||| || || |||| ||| |||||||| Sbjct 2870365 TTCAGGTGGTGGTCGATCTTCCCTTCAGGATTGACGCAGAACAAGTGGCGGCACTTTGCC 2870306 Query 27132 TCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTGCG 27172 ||||| ||||||||||||||||| || | || |||||||| Sbjct 2870305 TCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTGCG 2870265 >seq1 Length=64990205 Score = 118 bits (130), Expect = 8e-22 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| | |||||||| | |||||| ||| | ||||||||||| ||||||| || Sbjct 35302699 CTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGATTCTTCTTGGG 35302640 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| |||||||| ||||| ||||||||||||| ||||||| |||||||| Sbjct 35302639 AATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTTTTTATCTG 35302590 Score = 105 bits (116), Expect = 5e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| || ||||| ||||| | |||||| ||||| || |||| ||||| ||||||||| Sbjct 35303962 TTATAAACGGAACTGCCTCCTACTATCCAAACCATATCCACTTGATTTGTTAATTCTGGT 35303903 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 | || |||||||||| |||||||| | ||| || || | ||||||||||| | |||| Sbjct 35303902 TCCTCAATAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTTTGGA 35303843 Query 4285 AGCTCC 4290 | ||| Sbjct 35303842 GGTTCC 35303837 Score = 93.3 bits (102), Expect = 3e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115 |||||| |||||||| | ||||| |||||| ||||| || |||| |||||| || ||||| Sbjct 35308728 AAGTTTATATTTCTCCAAATCAATTTCTGGGAAAAATGTATCACTTTCAAATTCCTGCAT 35308669 Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166 |||||| |||||||| ||| ||| || || | ||||| ||||| || Sbjct 35308668 GATCCTTGTCACAAAGAGTCGTTGATGGCCGGGCTTGCTCATGGCTTCCTT 35308618 Score = 89.7 bits (98), Expect = 4e-13 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||| | |||||| |||||||||||||||||||||||||| | ||| || || || |||| Sbjct 35311895 ATTACTCATTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTTTCCTCCTGGACAT 35311836 Query 4028 TAGAAAGAACACTTGGATATTCTATCAAA 4056 ||||||||||| ||| || |||| ||| Sbjct 35311835 CAGAAAGAACACCTGGGTA-CCTATAAAA 35311808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361199890363154