Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq196 205 1e-47 seq402 178 2e-39 seq146 141 1e-28 >seq196 Length=2513712 Score = 205 bits (226), Expect = 1e-47 Identities = 548/824 (67%), Gaps = 19/824 (2%) Strand=Plus/Minus Query 176386 TTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAA 176445 ||||| || ||||||| | | |||||| | || ||| || |||| | || | Sbjct 1899231 TTGGGCTGCTGGGCAACGTGATGGTGGTGGTGATCCTCACAAAGTACAGGCGCCTCTGCA 1899172 Query 176446 ACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTT 176505 || || ||||| | ||| | ||| |||| || | ||||||||| || || || || Sbjct 1899171 TTCTGACCAACATCTACCTGCTCAACCTGGCCATCTGTGACTTGCTCTTCCTCTTCACGC 1899112 Query 176506 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 176565 |||| || ||||| |||||| | ||| || | || ||| |||||| | ||| Sbjct 1899111 TGCCCTTCTGGATCCACTATCT--GAA-GTGGAAGGAGTGGGTTTTTGGCCACTGTATGT 1899055 Query 176566 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 176625 | || ||||| ||| | | || ||| ||||| | || |||||| |||||||| Sbjct 1899054 GCAAGTTGCTCTCGGGGCTTTATTGCATCGGCTTGTACGGGGAGATCTTTTTCATCATCC 1898995 Query 176626 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAA 176685 |||| || ||||| ||||||| || | ||| |||| || ||| || || | | Sbjct 1898994 TGCTGACCTTAGACCGGTATCTGGCCATCGTCCATGCCGTGTTTGCCCTGCGGACCCGGA 1898935 Query 176686 CAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCC 176745 | || || |||||| | | | |||| || ||| ||||| ||| || || ||| Sbjct 1898934 CCGTCACTATTGGCATCATAAGCAGTGTCATCACGTGGGCCCTGGCGGGGCTGGTGGCCC 1898875 Query 176746 TCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG--GTTCAGTGTGATCC 176803 ||||||||||| |||| || ||| || | || | | |||| || | ||| Sbjct 1898874 TCCCTGAATTTATCTTCTATAAGGCCCAGGAGCAGTCCGGAATGCTGTTCTGTA-GTTCC 1898816 Query 176804 TTACTACCCAGAGATGTCTACAA--ATGTTTGGAGGCGCGCCCACG--TTGCAAAGGTGA 176859 | ||||| ||| | | | | | | |||| || | | ||| | | ||| Sbjct 1898815 CTG-TACCCCGAG--GACGAGGAGGACGCCTGGAAGCATTTTTATGCCTTG--AGGATGA 1898761 Query 176860 TTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCA 176919 | || || || | |||| ||||||||||||| |||||||||| | ||| |||| Sbjct 1898760 ACCTCTTGAGCCTGGCTCTGCCCCTGCTCATTATGGTGGTCTGCTACTCCGGAATCATCA 1898701 Query 176920 GAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCA 176979 | ||| |||| ||||||||| ||| ||| ||||||||||| ||||||| || ||| Sbjct 1898700 AGACGCTGATGAGATGCCCCAGCAGGAAAAAGCACAAGGCCATCCGGCTCATTTTCATCA 1898641 Query 176980 TCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCT 177039 ||||||||| || ||| |||| ||| | ||||||||| | || |||| || || | | Sbjct 1898640 TCATGGTGGTCTTTTTCATTTTCTGGGCCCCCTACAACCTGGTGGTCCTTCTCTCCGCTT 1898581 Query 177040 TTCACGCAACCCTTCTTAACCTGCAGTGTGCAT--TGAGCAGTAACTTGGACATGGCTCT 177097 |||| | |||||| | ||| ||||| ||||| | ||||| |||| | Sbjct 1898580 TTCA-AAAGATCTTCTTTGACATCAG-CTGCATGCAGAGCAAACAGCTGGACGTGGCCTT 1898523 Query 177098 GCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTT 177157 || | | || | | ||||||| ||||| ||| ||||||| | |||||||| || Sbjct 1898522 GCAGGTGACGGAGGTGATCTCCTACACGCACTGCTGCGTCAACCCCATCATCTACGCCTT 1898463 Query 177158 CGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACA 177201 ||| ||||||| ||| | | |||||| |||||||||||||| Sbjct 1898462 CGTCGGGGAGAGGTTCCGGAAGCACCTGCGCCACTTCTTCCACA 1898419 Score = 205 bits (226), Expect = 1e-47 Identities = 548/824 (67%), Gaps = 19/824 (2%) Strand=Plus/Minus Query 9500 TTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAA 9559 ||||| || ||||||| | | |||||| | || ||| || |||| | || | Sbjct 1899231 TTGGGCTGCTGGGCAACGTGATGGTGGTGGTGATCCTCACAAAGTACAGGCGCCTCTGCA 1899172 Query 9560 ACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTT 9619 || || ||||| | ||| | ||| |||| || | ||||||||| || || || || Sbjct 1899171 TTCTGACCAACATCTACCTGCTCAACCTGGCCATCTGTGACTTGCTCTTCCTCTTCACGC 1899112 Query 9620 TGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGT 9679 |||| || ||||| |||||| | ||| || | || ||| |||||| | ||| Sbjct 1899111 TGCCCTTCTGGATCCACTATCT--GAA-GTGGAAGGAGTGGGTTTTTGGCCACTGTATGT 1899055 Query 9680 GTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCC 9739 | || ||||| ||| | | || ||| ||||| | || |||||| |||||||| Sbjct 1899054 GCAAGTTGCTCTCGGGGCTTTATTGCATCGGCTTGTACGGGGAGATCTTTTTCATCATCC 1898995 Query 9740 TGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAA 9799 |||| || ||||| ||||||| || | ||| |||| || ||| || || | | Sbjct 1898994 TGCTGACCTTAGACCGGTATCTGGCCATCGTCCATGCCGTGTTTGCCCTGCGGACCCGGA 1898935 Query 9800 CAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCC 9859 | || || |||||| | | | |||| || ||| ||||| ||| || || ||| Sbjct 1898934 CCGTCACTATTGGCATCATAAGCAGTGTCATCACGTGGGCCCTGGCGGGGCTGGTGGCCC 1898875 Query 9860 TCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG--GTTCAGTGTGATCC 9917 ||||||||||| |||| || ||| || | || | | |||| || | ||| Sbjct 1898874 TCCCTGAATTTATCTTCTATAAGGCCCAGGAGCAGTCCGGAATGCTGTTCTGTA-GTTCC 1898816 Query 9918 TTACTACCCAGAGATGTCTACAA--ATGTTTGGAGGCGCGCCCACG--TTGCAAAGGTGA 9973 | ||||| ||| | | | | | | |||| || | | ||| | | ||| Sbjct 1898815 CTG-TACCCCGAG--GACGAGGAGGACGCCTGGAAGCATTTTTATGCCTTG--AGGATGA 1898761 Query 9974 TTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCA 10033 | || || || | |||| ||||||||||||| |||||||||| | ||| |||| Sbjct 1898760 ACCTCTTGAGCCTGGCTCTGCCCCTGCTCATTATGGTGGTCTGCTACTCCGGAATCATCA 1898701 Query 10034 GAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCA 10093 | ||| |||| ||||||||| ||| ||| ||||||||||| ||||||| || ||| Sbjct 1898700 AGACGCTGATGAGATGCCCCAGCAGGAAAAAGCACAAGGCCATCCGGCTCATTTTCATCA 1898641 Query 10094 TCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCT 10153 ||||||||| || ||| |||| ||| | ||||||||| | || |||| || || | | Sbjct 1898640 TCATGGTGGTCTTTTTCATTTTCTGGGCCCCCTACAACCTGGTGGTCCTTCTCTCCGCTT 1898581 Query 10154 TTCACGCAACCCTTCTTAACCTGCAGTGTGCAT--TGAGCAGTAACTTGGACATGGCTCT 10211 |||| | |||||| | ||| ||||| ||||| | ||||| |||| | Sbjct 1898580 TTCA-AAAGATCTTCTTTGACATCAG-CTGCATGCAGAGCAAACAGCTGGACGTGGCCTT 1898523 Query 10212 GCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTT 10271 || | | || | | ||||||| ||||| ||| ||||||| | |||||||| || Sbjct 1898522 GCAGGTGACGGAGGTGATCTCCTACACGCACTGCTGCGTCAACCCCATCATCTACGCCTT 1898463 Query 10272 CGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACA 10315 ||| ||||||| ||| | | |||||| |||||||||||||| Sbjct 1898462 CGTCGGGGAGAGGTTCCGGAAGCACCTGCGCCACTTCTTCCACA 1898419 Score = 104 bits (114), Expect = 3e-17 Identities = 242/360 (67%), Gaps = 19/360 (5%) Strand=Plus/Minus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGAC--TGTTGAGGCG 176935 |||| ||||| | |||| |||||||||| | ||| | |||||| || || || | Sbjct 1847716 TGCCCCTGCTGGTCATGGTCGTCTGCTACTCGGGAATCCT--GAAGACCCTGCTGCGGTG 1847659 Query 176936 CCCCAGCAAGAAGAAGT---ACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTA 176992 | || | |||||||| |||||||| | ||||||||||| || |||||| | | ||| Sbjct 1847658 TCGCAACGAGAAGAAGAGGCACAAGGCCGTGAGGCTCATCTTCGTGATCATGATCGTCTA 1847599 Query 176993 TTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT 177052 || |||| ||| | ||||||||| | || || || ||| ||||| || | | | Sbjct 1847598 CTTCCTTTTCTGGGCTCCCTACAACCTCGTCCTGCTCCTGGACACCTTCCAGGAGTTCTT 1847539 Query 177053 T--CTT---AACCTG-CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 177106 | ||| ||||| ||| | || ||| | ||||| || ||| | | || Sbjct 1847538 TGACTTGAGTACCTGCCAGAG------GACCAGCCAGCTGGACCAAGCCATGCAGGTGAC 1847485 Query 177107 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 177166 | || | | | || ||||| ||||||||||| | |||||||| ||||| ||||| Sbjct 1847484 GGAGACCCTGGGCATGACGCACTGCTGCATCAACCCCATCATCTACGCCTTCGTCGGGGA 1847425 Query 177167 GAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 |||||| ||| | |||| | ||||||| | || | |||| |||||||||| Sbjct 1847424 GAAGTTCAGACGGTACCTCTCTGTGTTCTTCCGAAAGCACATCGCCAAGCACCTCTGCAA 1847365 Score = 104 bits (114), Expect = 3e-17 Identities = 242/360 (67%), Gaps = 19/360 (5%) Strand=Plus/Minus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGAC--TGTTGAGGCG 10049 |||| ||||| | |||| |||||||||| | ||| | |||||| || || || | Sbjct 1847716 TGCCCCTGCTGGTCATGGTCGTCTGCTACTCGGGAATCCT--GAAGACCCTGCTGCGGTG 1847659 Query 10050 CCCCAGCAAGAAGAAGT---ACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTA 10106 | || | |||||||| |||||||| | ||||||||||| || |||||| | | ||| Sbjct 1847658 TCGCAACGAGAAGAAGAGGCACAAGGCCGTGAGGCTCATCTTCGTGATCATGATCGTCTA 1847599 Query 10107 TTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT 10166 || |||| ||| | ||||||||| | || || || ||| ||||| || | | | Sbjct 1847598 CTTCCTTTTCTGGGCTCCCTACAACCTCGTCCTGCTCCTGGACACCTTCCAGGAGTTCTT 1847539 Query 10167 T--CTT---AACCTG-CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 10220 | ||| ||||| ||| | || ||| | ||||| || ||| | | || Sbjct 1847538 TGACTTGAGTACCTGCCAGAG------GACCAGCCAGCTGGACCAAGCCATGCAGGTGAC 1847485 Query 10221 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 10280 | || | | | || ||||| ||||||||||| | |||||||| ||||| ||||| Sbjct 1847484 GGAGACCCTGGGCATGACGCACTGCTGCATCAACCCCATCATCTACGCCTTCGTCGGGGA 1847425 Query 10281 GAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 |||||| ||| | |||| | ||||||| | || | |||| |||||||||| Sbjct 1847424 GAAGTTCAGACGGTACCTCTCTGTGTTCTTCCGAAAGCACATCGCCAAGCACCTCTGCAA 1847365 >seq402 Length=911058 Score = 178 bits (196), Expect = 2e-39 Identities = 136/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 128709 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 128650 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || ||||||||||| | || | |||||||||||||||||| ||||| ||| | || Sbjct 128649 ACACCTAGCCCCATGTCGGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 128590 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| ||| ||||| || ||||||||||| Sbjct 128589 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCAT 128549 >seq146 Length=3351112 Score = 141 bits (156), Expect = 1e-28 Identities = 126/157 (80%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| |||| || ||| || || || ||||| |||||||| ||| |||| ||| Sbjct 1997085 CAGCGCCGCAGCTGCAGCCTCAGCGTCTTCAGCTTCTCCCCCAGCGAGCTCACGGGCTCC 1997144 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | || ||| |||||||||||||||||||||| ||||||||||||||| Sbjct 1997145 TTGAT---GTCCGGGCCCTGGCTCTCGGCCTGGGGCATCACCTCTTCCAGGTAAAACTGG 1997201 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 1997202 ATCATCTCGGACAAGGCTTGGCAACCCAGGTAACCCT 1997238 Score = 131 bits (144), Expect = 2e-25 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 ||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct 1994965 TCATTTTTTCATCTTCATTGTCATGTAGGCCTCTATGTAGTTGATGAAGATGTCAAACTC 1995024 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||||||| | |||||||||| Sbjct 1995025 ACTCATGGCTTTGTAGACCCCTCTCTCCTGGAGCT 1995059 Score = 95.1 bits (104), Expect = 1e-14 Identities = 113/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| |||||||||||||| || | |||||| ||||||||||||||||||| Sbjct 1998400 AAAGAAAGTCTTCACCCTGCTGAAGGCAGCTCGGAGCTCTCGGAGCATGTGGGGCAGGCT 1998459 Query 138357 GGTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415 ||||| || || || |||| || | |||| || | | | ||||| || Sbjct 1998460 GGTGGAGAA-GTGGGTGCAGCTGTTCTCAGATGGCGTGCCCTGGGCTGGGCTGGCCCCCA 1998518 Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAG 138446 ||| ||||||| ||||||||||| ||||| Sbjct 1998519 TCCCAGCCAGGAAGACCAGGCAACAGAGCAG 1998549 Score = 91.5 bits (100), Expect = 2e-13 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 138015 CTTGCTGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074 ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| || Sbjct 1996147 CTTACTGAAGGCGCTCTTCACCTGCTCCACGGCTTTGCTCTTATTCTCACAGGGCAGAAA 1996206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589990840562160