Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq5 347 1e-90 seq9 264 1e-65 seq962 208 9e-49 seq5509 158 1e-33 seq1028 122 1e-22 seq217 111 2e-19 >seq5 Length=22519077 Score = 347 bits (384), Expect = 1e-90 Identities = 412/557 (74%), Gaps = 16/557 (3%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||||| ||||| | | | | |||| | |||||||||||||||||||| Sbjct 6428988 AGCAGGGCTTCTATGTCAGGCTCGATGTCAATGGTCAGAAAGCGGTGGCTGTACCTGCGC 6428929 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| |||| || | ||||||| ||||||||| |||||||||| ||||| ||||||| Sbjct 6428928 ACAGGCATGCCATCCGGGCCCACCAGGAACTTCTCAAAGTTCCAGGACACGTTGTTGCGG 6428869 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 |||| |||||||||| |||| || |||||| ||| ||||| | |||||| || Sbjct 6428868 CACATGGGAGACCAGGTGATGAACTTGGGGTCTGTCATGAGCGCAGTGGCGTCGTCACTG 6428809 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 || || ||||| |||| | |||||| ||||||| || |||| | ||||||||| || Sbjct 6428808 GGTGCGGGCAGAGCCTGGCACAGGAAGACGAAGAGGGG--GTGCTCCTGCACCGTTCACA 6428751 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGA------------ 83344 || ||||||| |||||| | ||||| |||||||| ||| ||| || Sbjct 6428750 TCACACTTCTTGAAGAGTGTGAAGTTGGGCTCGAACCCGCCACCATGAATTTCTAGTTCC 6428691 Query 83345 CGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAAC 83404 ||| | ||| |||||| || |||||| |||| ||| || ||||| || |||||| Sbjct 6428690 ATGACATACTTGAGGGAATTCAGGATCTCTTTGTTCTTGGCATTCTCCTGATGCCCGAAC 6428631 Query 83405 TGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCG 83464 ||||| || | ||| || ||||| ||||| ||||| | | |||| ||||||||||||| Sbjct 6428630 TGGTTGCAGGAGAAGCCGAGCACCACCAGGCCCCGCGGCACAAGGCTCCGCTGCAGCTCG 6428571 Query 83465 TTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGC 83524 |||| || ||||| || |||| | | | |||||||| || || | ||| || |||||| Sbjct 6428570 TTCACTTGGGTGTAGTCGCGGATCCTCGTGCCTCAGAGCGAGGCCAGGTT-TCAATGAGC 6428512 Query 83525 AAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCT 83584 | ||| |||||| | | |||| | ||| || || || || | ||| |||| | | Sbjct 6428511 AGCACCTTGCCCCGCAGGGAGCCCAGGCTAACGGGCTCCCCACAGGT-CGCGGGTGCACA 6428453 Query 83585 GAGAAGGCGTACACAGA 83601 |||||||||| |||||| Sbjct 6428452 GAGAAGGCGTGCACAGA 6428436 >seq9 Length=18579217 Score = 264 bits (292), Expect = 1e-65 Identities = 321/436 (74%), Gaps = 11/436 (3%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||| ||||||| | | | | ||| | ||| ||||||||| ||| || Sbjct 10791059 AGCAGGGCTTCTATG-CGGGCTCGATGTCAATGGTGGGAAAGCAGTGGCTGTATCTGGGC 10791001 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| ||||| ||||||| || ||||| |||||||||||||||||| ||| || Sbjct 10791000 ACAGGCACGCCGTTCAAGCCCACCAGGAGCTTCTTGAAGTTCCAGGCCACGTCATTGTGG 10790941 Query 83177 CACACT----GGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTC 83232 ||||| |||||||||| ||||||| || ||| ||| ||||| | |||||| Sbjct 10790940 CACACACACCGGAGACCAGGTGATGAGCTTGGAGTCTGTCATGAGCGCAGTGGCGTCGTC 10790881 Query 83233 GCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTT 83292 || || || ||||| || || | |||||| | ||| | || || || ||| || || Sbjct 10790880 ACTGGGTGCGGGCAGAGCTTCCTGCAGGAAGACAAAGGGGGGGTGCACCTGTGCGCCATT 10790821 Query 83293 GACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGAC--- 83349 ||||||||| |||| |||||| | ||||| |||||||| ||| ||||| | ||| Sbjct 10790820 CACCTCGCACGTCTCAAAGAGCGTGAAGTTGGGCTCGAACCCGCCACCAGGCCTGACATA 10790761 Query 83350 ---GTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTG 83406 || ||| ||||| || |||||| | |||| || ||| ||||| || |||||||| Sbjct 10790760 CTGGTACTTGAGGGAGTTCAGGATCTCTTCGTTCTTGGTGTTCTCCTGATGCCCGAACTG 10790701 Query 83407 GTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTT 83466 ||| || ||||| || |||| ||||| ||||| || || ||| ||||||||||||| Sbjct 10790700 GTTGCAGGGGAAGCCGAGCATGACCAGGCCCCGCAACCCAAGTCGCTGCTGCAGCTCGTT 10790641 Query 83467 CATCTGAGTGTACTCC 83482 ||| || ||||| ||| Sbjct 10790640 CATTTGGGTGTAGTCC 10790625 >seq962 Length=133868 Score = 208 bits (230), Expect = 9e-49 Identities = 182/225 (81%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| |||||||||||||| | | | | ||| || ||||| |||||||||||||| Sbjct 46279 AGCAGGGCTTCGATGTCGGGCTCGATGTCGATGGTGGGGAAGCGGCGGCTGTACCTGCGC 46220 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| |||||| | ||||||| |||||||||||||||||||| ||||||||||||| Sbjct 46219 ACGGGCACGCCGTCCGGGCCCACCAGGAACTTCTCGAAGTTCCAGGACACGTCGTTGCGG 46160 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| || ||||||| | ||||| ||||||| ||| ||||| ||||||||| Sbjct 46159 CACACGGGGGACCAGGTGACGAGCTTGGGGTCGGTCATGAGCGCCGCGGCGTCGTCGCTG 46100 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCC 83281 ||||| |||| | |||| || ||||| ||||||| || || ||| Sbjct 46099 GGCGCGGGCA-GCCCTCCCGCAGGAAAACGAAGAGGGGGTGCGCC 46056 Score = 197 bits (218), Expect = 2e-45 Identities = 196/253 (77%), Gaps = 3/253 (1%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 45589 CCTGGTGCCCGAACTGGTTGCACGGGAAGCCGAGCACGACCAGGCCCCGCGGCCCGAGGC 45530 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||||||||||||||| ||||| || || ||||| | |||||||| || || | Sbjct 45529 GCCGCTGCAGCTCGTTCATCTGGGTGTAGTCGCGCACCGTCGTGCCTCAGAGCGAGGCCA 45470 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 ||||||||||||||| ||| |||||| | |||| | |||||| || || || |||| Sbjct 45469 CGTTCTCGATGAGCAGCACCTTGCCCCGCAGCGAGCCCAGGCTCACGGGCTCCCCGCCGG 45410 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGATC---TGGTCTCTGCCGCGGCAAGCTGTG 83627 | | |||||| || ||||| |||| ||| || | || | | ||| | || |||| | Sbjct 45409 TCAGCGGGCGCGCAGAGAACGCGTGCACGGAGCGCGGGGCCGCGGCCCCCGCCAGCTTAG 45350 Query 83628 CCGCGTACTTGGC 83640 | ||| || |||| Sbjct 45349 CGGCGCACATGGC 45337 >seq5509 Length=9806 Score = 158 bits (174), Expect = 1e-33 Identities = 304/438 (69%), Gaps = 13/438 (3%) Strand=Plus/Minus Query 83158 CCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAG 83217 ||||| ||||| | |||||| || | |||||||| ||| || ||||| ||| ||| Sbjct 9144 CCAGGTGACGTCATCGCGGCATACCAG-GACCAGGCGGTGAACTTGGGGTGTGTCATGAG 9086 Query 83218 CGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATG 83277 || || | ||||| | || ||||| ||| | || |||||| | ||| | | || Sbjct 9085 CGCTCTGGCACCCTCGCTGGCTGCGGGCAGAGCCCC-CGCAGGAAGACAAAGGGGG--TG 9029 Query 83278 TGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTT 83337 || || || | |||| ||||||||| |||||||| ||||| |||| || ||| Sbjct 9028 CACCTCCGCGCCACTCACCTTGCACTTCTCCAAGAGCATGAAGTTGGGCTTGAGCCCGCC 8969 Query 83338 CCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTG 83397 ||||| | || || | | | |||| || |||||| | ||| | || | ||| | Sbjct 8968 ACCAGGCCTGATGTACATGAAGGAATTCAGGATCTCTTTACTCTTG---TTCTTCTGATC 8912 Query 83398 ACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTG 83457 | |||||||||||||||||| || ||| | ||||| |||| | || |||||| |||| Sbjct 8911 -CTGAACTGGTTACACGGGAAGCCCAGCCCGACCAGGCCCCAGGGCCCAAGGCGCTGCTG 8853 Query 83458 CAGCTCGTTCATCTGAGTGTACTCCCGGACC-GTGCTACCTCAGAGGGACGCTACGTTCT 83516 ||||||||| ||| |||| |||| |||| ||| |||||||| || || || ||| Sbjct 8852 CAGCTCGTTGGCCTGGCTGTAGTCCCAGACCTTTGC--CCTCAGAGCGAGGCCACACTCT 8795 Query 83517 CGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCG 83576 | ||||||| ||| ||| | | | |||| | |||| | || || || |||| | | Sbjct 8794 C-ATGAGCAGCACCTTGCCTCACACGGAGCCCAGGCTC-CGGGCTCCCCACCGGCCAGTG 8737 Query 83577 GGCGTGCTGAGAAGGCGT 83594 ||| | ||||| |||| Sbjct 8736 AGCGCACAGAGAATGCGT 8719 >seq1028 Length=121932 Score = 122 bits (134), Expect = 1e-22 Identities = 177/245 (72%), Gaps = 10/245 (4%) Strand=Plus/Plus Query 83294 ACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGC 83353 |||| ||||||||| |||||||| ||||| |||| || ||| |||| | || || | Sbjct 21643 ACCTTGCACTTCTCCAAGAGCATGAAGTTGGGCTTGAGCCCGCCATCAGGCCTGATGTAC 21702 Query 83354 TTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACAC 83413 | |||| || |||||| || ||| | || | ||| | | ||||||||||||| Sbjct 21703 AGGAAGGAATTCAGGATCTCTTCACTCTTG---TTCTTCTGATC-CTGAACTGGTTACAC 21758 Query 83414 GGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGA 83473 ||||| || ||||| ||||| |||| | || |||||| ||||||||||||| ||| Sbjct 21759 GGGAAGCCCAGCACGACCAGGCCCCAGGGCCCAAGGCGCTGCTGCAGCTCGTTGGCCTGG 21818 Query 83474 GTGTACTCCCGGACC-GTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCG 83532 |||| |||| |||| ||| |||||||| || || || || ||||||| ||| Sbjct 21819 CTGTAGTCCCAGACCTTTGC--CCTCAGAGCGAGGCCACACTC---ATGAGCAGCACCTT 21873 Query 83533 GCCCC 83537 ||||| Sbjct 21874 GCCCC 21878 >seq217 Length=2245263 Score = 111 bits (122), Expect = 2e-19 Identities = 204/290 (70%), Gaps = 13/290 (4%) Strand=Plus/Minus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||| ||| ||||||||| ||| ||| Sbjct 1400908 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCGCGCCTGC 1400850 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || | || || |||||||| || |||||||||| || || | ||||||| Sbjct 1400849 TGGTGCACCTCTTCCCCGAGCTCTTCACCCACGAGAACCTGCGCAAACAGTACAACTGCA 1400790 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTC---CGGCAC 50584 ||||||| |||||||| |||| || |||||| ||| | | |||| || ||| Sbjct 1400789 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGTCCCGCAT---CAAGCTCATTCGCCAC 1400734 Query 50585 TATGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTG 50644 || |||||| |||| | || ||| ||||| ||||| |||| ||||| || Sbjct 1400733 TACGTGCAGCTGCTCTATCCCCGGGCCAAGAACGACCGCGTCTGGACGCTGGAGTTCGTG 1400674 Query 50645 GCGTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 | ||||||||||||||||| ||||| | |||||| || |||||| Sbjct 1400673 GGCAAACTGGACGAGCGCTGCCGCCGCCG--GGACACGGAGCAGAGGCGC 1400626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608708113526160