Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq589 1638 0.0 seq303 1256 0.0 seq32 100 2e-16 >seq589 Length=466317 Score = 1638 bits (1816), Expect = 0.0 Identities = 1389/1719 (81%), Gaps = 78/1719 (5%) Strand=Plus/Minus Query 107088 AGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCATC-----CACAAGGGT-- 107140 ||||||| |||| ||||| || |||||||| ||| ||| || | ||||||| Sbjct 188984 AGCATGAGCAGCTAGTTTGTAGGGTCAGGTTATAGACCTCCTTCAGCAACCCAAGGGTAA 188925 Query 107141 ------CTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACC 107194 | |||||||| |||||||||||||||||| ||| |||| | || ||| ||| || Sbjct 188924 GAAGTTCCTAGGCAGGTCTTGACTGAGGATATTTGCCTAGAGAAAAAATATAT-TTTGCC 188866 Query 107195 ATCACTCTGGAGTTGAACTTGATGTT--------------CTGGATTAGTTTGTAATTAA 107240 | |||| |||||||| | ||| |||| | || |||||||||||| | Sbjct 188865 ACCACTTTGGAGTTGGAGTTGTTGTTTCTGGGAACACATTCAGGGTTAGTTTGTAATCGA 188806 Query 107241 AGGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCAC---CTTGCCTGTGCCCAAACTCTC 107297 |||||||||||||||||||||||| | ||||| | ||| |||| || |||||||| Sbjct 188805 AGGCATTTTGTTCTGTCCAAGGATTCCAACCTCCTCTTTCTTCCCTGGGCTCAAACTCTA 188746 Query 107298 CTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCAT 107357 |||||||||| ||||||||||| | |||||||||| || ||| || ||| | Sbjct 188745 TTGATCTCCCAGGCCATGAAGATGATTTGGTGGAAGAAA---CTCTGCAGGCAGCATTAC 188689 Query 107358 CTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGG 107417 ||||||||||||||||||||| ||||||||||| ||||| |||||||| | || ||||| Sbjct 188688 CTGTGGGCCCTGGGCTGCTATTTGCTGCTGGCCATTGTTGCTCTGAGATTCTCTCTCAGA 188629 Query 107418 TTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGT 107477 || ||||| || | || ||||||||||||||||||| |||||||| Sbjct 188628 TTGAAATGCGACTTTGAGTCCTTGGATCTGGAGTCCA---------------AGCACTGT 188584 Query 107478 AGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGG 107537 |||||||| |||||||| |||| || || |||||| ||||||||||||||||||| | Sbjct 188583 AGGGACATCTTGTACAAGTCCCTGCAGTTGACAGCAAGGAGATCCATCAACTGTTCTAGA 188524 Query 107538 ATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAG 107597 |||| | ||||||| ||||||||||| | |||| ||||| |||| ||||| || ||| Sbjct 188523 ATCATCCAAGGGGACAAGGAAGCAGTGATTGAGGCTCTCCTGGACAGGCTGGAGGTCAAG 188464 Query 107598 AAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGC 107657 || |||||| |||| |||| | ||| | ||| ||||||| ||||||||||||||| | Sbjct 188463 AAGAAGCGGGAGCCTTTCACAGACACTGACTACATCAACATGACCAGAGACTGTGAGTAC 188404 Query 107658 TTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCC 107717 || |||||| |||||||||||||||||| |||||| || ||||| ||| |||||||||| Sbjct 188403 TTTAAGGCCAAAAGGAAGTTCATACAGTACCCACTCAGCAAAGAGGAGTTAGACTTCCCT 188344 Query 107718 ATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCC 107777 ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 188343 ATTGCATACTCTATGGTGGTCCATGAGAAGATTGAAAACTTTGAAAGGCTGCTGAGAGCT 188284 Query 107778 GTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTC 107837 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| Sbjct 188283 GTGTATGCCCCTCAGAACATATATTGTGTCCACGTGGATCAGAAGTCCCCAGACACTTTC 188224 Query 107838 AAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTG 107897 |||||||| |||| ||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct 188223 AAAGAGGCAGTCAGGGCAATTATTTCATGCTTCCCAAATGTCTTTATAGCCAGTAAGTTG 188164 Query 107898 GTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGAC 107957 || | |||||||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct 188163 GTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCGGACCTGAACTGTATGGAAGAC 188104 Query 107958 TTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCC 108017 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||| Sbjct 188103 TTGCTCCAGAGCTCAGTGCCCTGGAAATACTTGCTGAATACATGCGGGACAGACTTTCCC 188044 Query 108018 ATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATG 108077 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 188043 ATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGAACAGTATG 187984 Query 108078 GAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACA 108137 ||||| ||| ||||| |||||| ||||| | ||||||| |||| | ||||||||| ||| Sbjct 187983 GAGTCCGAGATACCTACTGAGTACAAAAGATCTCGCTGGCAATATCACTATGAGGTAACA 187924 Query 108138 GACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTC 108197 |||||| | || || | ||||| |||||||||||||||| |||||||||| |||||| Sbjct 187923 GACACAATACACGTAACTAACAAGAAGAAGGACCCTCCCCCTAATAATTTACCTATGTTC 187864 Query 108198 ACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCT 108257 | ||||||||| || ||||||| ||||||| ||||||||| || ||||| || ||||| Sbjct 187863 ATAGGGAATGCTTACATTGTGGCTTCTCGAGGCTTTGTCCAGCAGGTCTTTGAGAACCCC 187804 Query 108258 AAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGG 108317 ||| ||| |||| |||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 187803 AAAGCCCGGCAACTGATTGAGTGGGTGAAAGATACCTATAGCCCCGACGAACACCTCTGG 187744 Query 108318 GCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCAC 108377 ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| |||| Sbjct 187743 GCCACGCTTCAGCGTGCCCCATGGATGCCTGGCTCTGTTCCCTACCACCCCAAGTTTCAC 187684 Query 108378 ATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTC 108437 || ||||||||| ||||||| |||||||| || || |||||| ||| || ||||| || Sbjct 187683 ATGTCAGACATGGCTGCCATTGCCAGGCTGGTAAAATGGCAGGGCCATGAAGGAGACATC 187624 Query 108438 AGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTAC 108497 ||| ||||||| || ||||| || |||||||||| ||||| | || | ||||| ||||| Sbjct 187623 AGCTTGGGGGCACCATATGCGCCTTGCTCTGGAACCCATCAGCGGTCTATCTGTATTTAT 187564 Query 108498 GGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 || |||||||| |||||||||| |||||||||||||| ||||| |||||||| ||| Sbjct 187563 GGCATTGGGGACCTTCACTGGATTCTTCAGAACCATCACCTGTTGGCCAACAAGTTCGAC 187504 Query 108558 CCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATC 108617 || | |||||||||||| || || |||||||||||||| ||| |||| ||||||||||| Sbjct 187503 CCAAAGGTGGATGATAATGTTCTTCAGTGCTTAGAAGAATACTTACGGTATAAGGCCATC 187444 Query 108618 TATGGGACTGAACTTTGAG---------------------------CTGCACTGTGGGCC 108650 | ||||| ||| |||| ||| | |||||| | Sbjct 187443 -AACAGACTGTACTCTGAGATACACTGAGAGAACTGCTACCTCAGACTGAAATGTGGGGC 187385 Query 108651 AGGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGC 108709 | | || ||||| ||||||||||| || |||| || |||||||||||| ||| ||| | Sbjct 187384 AAGAACATGTGCAAACATGCCCAGAATGTGCTGGGACAGTGTGGGGTGGGAGACCAGGTC 187325 Query 108710 TGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748 | ||||||||| |||||||| |||||| || |||||||| Sbjct 187324 TCTGGAATCCACGGCATCCCACAGGGTTAGGGGGCTGCT 187286 >seq303 Length=1548241 Score = 1256 bits (1392), Expect = 0.0 Identities = 1077/1330 (81%), Gaps = 18/1330 (1%) Strand=Plus/Plus Query 107268 CTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGG 107327 |||||| |||| |||||||||||||||| |||||||||||| |||| |||||| | || Sbjct 965569 CTCCTCTTCCTTCCCTGTGCCCAAACTCTACTGATCTCCCATACCATAAAGATGATTTGG 965628 Query 107328 TGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTG 107387 |||| |||||| || | ||| | | | |||||||||||||||| |||| ||||| || Sbjct 965629 TGGAGGAAGAAACTCTATCGGCAGCCTAACCTGTGGGCCCTGGGCT-CTATTTGCTGTTG 965687 Query 107388 GCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTG 107447 ||| ||||| |||||||| | || ||||| || |||||||| | |||||| |||||||| Sbjct 965688 GCCATTGTTGCTCTGAGATTCTCTCTCAGATTGAAATGTGACTTTGATTCCCTGGATCTG 965747 Query 107448 GAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTG 107507 ||||||| ||||| | || |||||| ||| ||||| |||||||| |||| || || Sbjct 965748 GAGTCCACAGACTTTCGAAGCAAGCACTATAGAGACATCTTGTACAAGTCCCTGCAGTTG 965807 Query 107508 CCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTC 107567 |||||| |||||||||||||| |||| | |||| | ||||||| |||||||| || | Sbjct 965808 ACAGCAAGGAGATCCATCAACTCTTCTAGAATCATCCAAGGGGACAAGGAAGCAATGATT 965867 Query 107568 CAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTAT 107627 |||| || || |||| |||||||| ||||| ||| || |||| | | | ||| | Sbjct 965868 GAGGCTCTTCTGGACAGGCTGGAAGTTAAGAAGAAGTGGGAGCCTTTTATAGACACTGAC 965927 Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTC 107687 ||| ||||||| ||||||||| ||||| ||| || ||| ||||||||||||||| || | Sbjct 965928 TACATCAACATGACCAGAGACGGTGAGTTCTTTAAAGCCAAAAGGAAGTTCATACTGTAC 965987 Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 ||||| || ||||||||| |||||||||| ||||| ||||| ||||||| ||| ||||| Sbjct 965988 CCACTCAGCAAAGAAGAGTTAGACTTCCCTATTGCATACTCTATGGTGGCCCACAAGAAG 966047 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 | ||||||||||||| |||||||| |||| |||||| | |||||||||||||| | ||| Sbjct 966048 ACTGAAAACTTTGAAAGGCTGCTGAGAGCTGTGTATACTCCTCAGAACATATATTCTGTT 966107 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 ||| |||||| |||||||||||| |||||| ||||||| ||| ||| |||||||| ||| Sbjct 966108 CACATGGATGAGAAGTCCCCAGAAACTTTCGAAGAGGCATTCAGGGCAATTATTTCATGC 966167 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||| Sbjct 966168 TTCCCAAATGTCTTCATGGCCAGTAAGTTGGTTCGGGTGGTTTATGCCTCCTGCTCCAGG 966227 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 || || || |||||||||||||||||||||||||||||||||||| ||| |||||| ||| Sbjct 966228 GTACAGGCAGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAATGCTATGGAAATAC 966287 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047 || |||||||||||| | |||||||| || ||||||||||||||||| |||||||||||| Sbjct 966288 TTCCTGAATACATGCAGAACAGACTTTCCTATAAAGACCAATGCCGATATGGTCCTGGCC 966347 Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaa 108107 ||||| ||| |||| || ||||||||||||||||| ||| ||||| |||||| || Sbjct 966348 CTCAAAATGCTGAATGGGAAGAACAGTATGGAGTCCGAGATACCTACTGAGTACA----- 966402 Query 108108 aaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAG 108167 ||||| | ||||||||| ||||||||| | ||| || | |||||||||| Sbjct 966403 ---------AAATATCACTATGAGGTAACAGACACAATATACATAACTAACAAGATGAAG 966453 Query 108168 GACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGA 108227 |||||||| ||| || |||||| || |||| ||||||||| ||||||| ||| || Sbjct 966454 GACCCTCCACCTAGTATTTTACCTAT-TTCATGAAGAATGCCTACATTGTGGCTTCTTGA 966512 Query 108228 GCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAA 108287 | ||||||||| || ||||| || ||||| ||| ||| |||| |||| |||| || Sbjct 966513 GGCTTTGTCCAGCAGGTCTTCGAGAACCCCAAAGCCCGGCAACTGATTGAGTGGG--CAA 966570 Query 108288 GACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCT 108347 || |||||||||||||| |||||||||||||||| ||||||||||| || ||||||||| Sbjct 966571 GATACCTATAGCCCCGATGAACACCTCTGGGCCATGCTTCAGCGTGCCCCATGGATGCCT 966630 Query 108348 GGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTC 108407 ||||||||||| ||||||||||| |||||| ||||||| |||||| ||||||| Sbjct 966631 GGCTCTGTTCCCTACCACCCCAAGTTTCACATGTCAGACACAGCTGCCACTACCAGGCTG 966690 Query 108408 GTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCT 108467 || ||||||||| ||| | |||| ||||||||||||| ||||||||||| |||||| Sbjct 966691 GTAAAGTGGCAGGGCCATAAAAGAGACATCAGCATGGGGGCACCTTATGCACCTTGCTCT 966750 Query 108468 GGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAG 108527 |||| ||| | | | | ||||| ||||| || | |||||| | |||||||||| ||| Sbjct 966751 GGAACCCACCAGCAGTCTATCTGTATTTATGGCGTTGGGGACTTTCACTGGATTCTTCAG 966810 Query 108528 AACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGC 108587 ||||||||||| ||| | ||||||||| ||| | ||||||| |||| || || |||||| Sbjct 966811 AACCATCACCTGTTGACCAACAAGTTTAACCTAAAGGTGGATAATAATGTTCTTCAGTGC 966870 Query 108588 TTAGAAGAGT 108597 |||||| ||| Sbjct 966871 TTAGAACAGT 966880 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/92 (83%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 108657 TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAA 108716 ||||| ||||||||||| || |||| || ||||| | |||| ||| ||| || ||||| Sbjct 967182 TGTGCAAACATGCCCAGAATGTTCTGGGACAGTGTGAG-TGGGAGACCAGGTCTCTGGAA 967240 Query 108717 TCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748 ||||||||||||| |||||| || |||||||| Sbjct 967241 TCCATGGCATCCCGCAGGGTTAGGGGGCTGCT 967272 >seq32 Length=9580343 Score = 100 bits (110), Expect = 2e-16 Identities = 197/286 (69%), Gaps = 8/286 (3%) Strand=Plus/Plus Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCT 108335 || |||| |||||||| |||||||| || || | ||||||||||| ||||| | | | Sbjct 5093512 GAGTGGGCGAAAGACACATATAGCCCGGATGAGTATCTCTGGGCCACTATTCAGAG-GAT 5093570 Query 108336 CCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATGAC 108391 || || | | |||||||| | |||| || || ||||| |||| || || ||| Sbjct 5093571 CCCTGAAGTCCCTGGCTCACTGTCCTTAAGTCA---TAAGTACGACATGTCCGATATGCA 5093627 Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451 || || || ||| | ||||| ||||||||| || || || || || ||| || || Sbjct 5093628 AGCAATTGCTAGGTTTGTCAAATGGCAGTACTTTGAAGGTGACGTTTACAAGGGCGCACC 5093687 Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511 ||| |||||||| || | || | | || | || ||| || || || ||| | Sbjct 5093688 CTATCCACCCTGCAACGGGGTGCACGTGCGCTCCGTGTGTGTTTTTGGAGCAGGTGACTT 5093747 Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 | ||||||| || | || || ||||| || || || ||||||||| Sbjct 5093748 GAACTGGATACTGCGCAAGCACCACCTGTTTGCCAATAAGTTTGAC 5093793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348219334293996