Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5750 104 2e-17 seq1765 104 2e-17 seq139 98.7 9e-16 seq29 93.3 4e-14 seq69 89.7 5e-13 seq62 86.0 6e-12 seq374 82.4 7e-11 seq247 82.4 7e-11 >seq5750 Length=9448 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 8314 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8255 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 8254 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 8195 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 8194 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 8135 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 8134 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 8088 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 8542 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8483 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 8482 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 8423 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 8422 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 8363 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 8362 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 8316 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 8086 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8027 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 8026 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 7967 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 7966 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 7907 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || ||||| || ||||| || ||||| || | |||| || ||| Sbjct 7906 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGAGGGGGT 7859 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || |||| ||||| || |||||| |||| || || || Sbjct 8770 ATGCAGATCTTCGTGAAAACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8711 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 8710 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 8651 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 8650 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 8591 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 8590 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 8544 >seq1765 Length=41513 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 9612 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9553 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 9552 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9493 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 9492 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 9433 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 9432 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 9386 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || |||| ||||| || |||||| |||| || || || Sbjct 9840 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9781 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 9780 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9721 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 9720 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 9661 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 9660 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 9614 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 9384 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9325 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 9324 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9265 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| |||||||| || | ||| || ||| Sbjct 9264 CAGCGGCTGATCTTTGCCGGCAAGCAGCTGGAAGACGGGCGCACCCCGTCCGACTACAAC 9205 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 9204 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 9158 >seq139 Length=3560323 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || || ||||| ||||| || || || ||||| || || || || Sbjct 1635822 ACCTCATCTTTGCTGGTATATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTT 1635763 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || ||| ||||| || || || || ||||| |||||||||||||| || || Sbjct 1635762 CCCAGGTTCTGCTGATTGCTCTTCCGGTTACAGGAATCTTTGTAGAGCATGTATGGGGTA 1635703 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| ||||| || ||||| Sbjct 1635702 CCTGTCTCTGTCTGAGACTCAATAATCGC 1635674 >seq29 Length=10643064 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| || || || || || || || ||||| |||| |||||||| Sbjct 9522603 AAGATGCAGATTTTCGTGAAAACCCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCC 9522544 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || || | | |||| || || | || ||| |||||||| | || || || Sbjct 9522543 TCGGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 9522484 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||| | || || || |||||||| || |||||||| ||| || || || Sbjct 9522483 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGACGGGCGCACTTTGTCTGACTAC 9522424 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||||||||||| || || || |||||||| || | ||||| Sbjct 9522423 AACATTCAAAAGGAGTCCACGCTTCATCTTGTGTTGAGACT 9522383 >seq69 Length=5728823 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | | ||||| || Sbjct 4210317 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGCGGTTGAGCCCAGT 4210376 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| |||||||| ||| | || || |||||| Sbjct 4210377 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 4210436 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||||||| | || || | ||| | || || || Sbjct 4210437 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCGCACTCTCTCAGACTACAAT 4210496 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || || || |||| || | || ||||| || Sbjct 4210497 ATTCAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTCAGGGGTGG 4210543 >seq62 Length=6495742 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| ||||| || |||||| |||| || ||||| Sbjct 4413104 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGT 4413163 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || | |||||| | ||| ||| ||| ||| | ||||| |||||| Sbjct 4413164 GACACCACTGAGAGTGTCAAAGCTAAAATCCAAGACCGGGAGGGCATCCCGCCTGACCAG 4413223 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || || || ||||||||| |||| || Sbjct 4413224 CAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGA 4413258 >seq374 Length=1022520 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/223 (69%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||| | || || || || || || || | ||| |||| |||||||| Sbjct 479376 AAGATGCAGATTTTCATGAAAACCCTCACGGGGAAGACCACCACTCTCGAGGTTGAACCC 479317 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGC--GGACAAGGAAGGCGTGCCGCCCG 31307 || || | | |||| ||||| | || | | ||| |||||||| | || || | Sbjct 479316 TCGGATACGATAGAAAATGTCAAG--GCTAAGACCCAGGATAAGGAAGGAATTCCTCCTG 479259 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 | ||||| | || || || |||||||| || |||||||| ||| || | | Sbjct 479258 ATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGACGGGTGCACTTTGTCTTACT 479199 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 | ||||||||||| || || || |||||||| || | ||||| Sbjct 479198 ACAACATTCAAAAGGAGTCCACGCTTCATCTTGTGTTGAGACT 479156 >seq247 Length=1816170 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||| ||||| ||||| || |||||| | || || || || Sbjct 1422772 ATGCAGATCTTTGTGAAGAGCCTGACTGGCAAGACCATCACCCTTGAGGTGGAGCCCAGT 1422713 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| | | ||||||| ||| || || |||||| Sbjct 1422712 GACACCATTGAGAATGTCAAAGCTAAAATCGAG-ACAAGGAGGGCACCCCACCTGACCAG 1422654 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||||||| | || || | || || || || || Sbjct 1422653 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCGCGCTCTGTCAGACTACAAT 1422594 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || || || |||| || | || ||||| || Sbjct 1422593 ATTCAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTCAGGGGTGG 1422547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445701462979680