Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq10 190 3e-43
seq139 125 9e-24
seq190 111 2e-19
seq410 105 8e-18
seq115 102 1e-16
seq28 89.7 6e-13
seq5245 86.0 8e-12
seq193 84.2 3e-11
seq75 84.2 3e-11
seq513 82.4 1e-10
seq30 82.4 1e-10
>seq10
Length=16450340
Score = 190 bits (210), Expect = 3e-43
Identities = 489/739 (66%), Gaps = 23/739 (3%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| ||| |||| | || ||||| ||||| | || || || || || || || | |||
Sbjct 11919839 CATCACTTCCATCCTCTGATATTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCCTTTC 11919780
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATT--GTAAAtttttttAAAT 33395
||| ||||| |||||||| ||||| ||| | | ||| | ||| || ||||
Sbjct 11919779 TCGTGAAATATTCTCCATGAAGTCAAATGGACT--TTCTATTCGGAAAACCTTGCTAAAA 11919722
Query 33396 CCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455
|||| || | | |||||| | |||||||| || || ||||||| |||
Sbjct 11919721 CCCAGCTCCAGCCTGAGTCTATCAGTCACGAATTCAATGTACCCCTTCATCAGAGTGCAA 11919662
Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515
||||| | |||| || ||||| | ||| | || || || || || || || ||
Sbjct 11919661 TTCATCGCAATGACATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCCAACA 11919602
Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575
|| || || || || | | || | | || ||| || | | ||||| |||
Sbjct 11919601 GCGTTGGTGATGATCTCTTTCACCCTCTGCTCTGCAGGTTTGTGCAGCAGGTGTTTGAAC 11919542
Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635
|||| || || || || ||||||| |||||| ||||| ||| | | || ||| || ||
Sbjct 11919541 ATCAGGCAGGCAAAGTCTCAGTGCAAACCCTCATCTCTGCTACTCATTTGGTTGGAGAA- 11919483
Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695
|||| || |||| ||| | | || || ||||| ||||| | || ||
Sbjct 11919482 -TGAGGCCAGGCACCAGGTCTCATTTCTTGAGCCAGAATATCGGCGC-----------AA 11919435
Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTG 33752
|||||||||||||| |||| ||||| || | || | |||||||| ||| | ||
Sbjct 11919434 AAGAAGATTCCTTCCACTGTGGCAAACGCTACAACACGTTCTCCATAGGCGGTCTCTTTG 11919375
Query 33753 T-CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTA-CACAAGGCATCGTTTCTA 33810
| | || ||||| ||||| | | || | || || ||||||||||||| || |
Sbjct 11919374 TTCCTG-ATCCAACGCAAGGCCCAGCCAGGCTGCCTTCTTGGCACAAGGCATCGTCTCCA 11919316
Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870
||| || ||||| | | |||| || |||||||| | ||| || || | ||||
Sbjct 11919315 CGGCGTTGAAGAGCAACTCCCTTTCCTTGGCATCTTTAATGTCAGTGTCAATGAGGAGAC 11919256
Query 33871 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33930
| |||||||| ||||| |||||||| ||||| || || || | ||||||||| | || |
Sbjct 11919255 TGTACATTTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCTGTAGAAACAGCGGGCTT 11919196
Query 33931 CGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCAC 33990
|||| ||||| |||||| | ||| || || | || || ||||| || |||| |
Sbjct 11919195 CGGTGATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTCTCATTGGTGATGCCATGGC 11919136
Query 33991 TGGCTGCAAAAAACGCCAA 34009
|||| | || || |||||
Sbjct 11919135 TGGCAACTAAGAAGGCCAA 11919117
>seq139
Length=3560323
Score = 125 bits (138), Expect = 9e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| |
Sbjct 1651056 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 1650997
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
|||||||||||||||| ||| |||||||| || ||||| ||||| || || | | ||||
Sbjct 1650996 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 1650937
Query 62508 CTATTTCTAAGACCGTA 62524
|| ||||| | ||| ||
Sbjct 1650936 CTGTTTCTTATACCATA 1650920
Score = 96.9 bits (106), Expect = 4e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| |||||||||||| |||||||| ||||||||||| || | || || || || | |
Sbjct 1634486 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 1634427
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
||||| || |||||||| ||||| || | ||| || ||| | | || || |||||||
Sbjct 1634426 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 1634367
Query 63383 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415
|| |||| ||| || || | ||||||| ||
Sbjct 1634366 AGGCTCCAGGTAAATAGCAAATGCTCCAGGTCG 1634334
Score = 96.9 bits (106), Expect = 4e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687
|| || |||||||| || | | || || || | ||| || || || || || || |||
Sbjct 1639122 TAGGTTTCATATGGGCCATGTTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 1639063
Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747
||||||||||||||||| | |||||| | || || || || || ||||| |||||
Sbjct 1639062 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 1639003
Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807
| | |||||||| || || || | ||||| || ||||| || ||||| | ||| |
Sbjct 1639002 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATAGGGCGATGACGT 1638943
Query 62808 TTATTAGA 62815
||||| ||
Sbjct 1638942 TTATTTGA 1638935
Score = 93.3 bits (102), Expect = 5e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065
|||| |||| ||| |||||||| ||||| | || || | || || || || || ||||
Sbjct 1618135 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 1618076
Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125
||||||| || || || | ||||| | || || ||| |||| || |||| ||| || |
Sbjct 1618075 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1618016
Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171
||| || || || || ||| | |||| ||||| || || |||||
Sbjct 1618015 GTTCCACAGTAGTGACCCCACTGTATAAACCTTGGATTACTTTCAT 1617970
>seq190
Length=2579675
Score = 111 bits (122), Expect = 2e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548
|||||||||||||||| | ||| || | |||||||| | ||||||||||||| |||
Sbjct 2425151 GTTACTTTCTATGATGTGTATATTATTCTCCAAGCTTTTGTACTGACTACTGCAGTATTT 2425092
Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607
|||| | |||||| | |||||||||||| |||| ||||||||| ||| ||| | ||||
Sbjct 2425091 CTTGGTTTGACTATGTATACTCTACAATCTAAGAAAGATTTCAGCAAATTTGGAGCAGG 2425033
Score = 93.3 bits (102), Expect = 5e-14
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232
|||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||
Sbjct 2439437 GCTCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCCGCCAGCGTGCACA 2439378
Query 188233 TACGAATGG 188241
| || ||||
Sbjct 2439377 TCCGCATGG 2439369
Score = 86.0 bits (94), Expect = 8e-12
Identities = 82/104 (79%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 188241 GCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAACAACGGCAACA 188299
|| |||||||||||||||||| |||||| ||| ||| ||| ||||| || | |||
Sbjct 2431642 GCCTTTCTAAGAAAAGTCTACACCATCCTTTCTCTGCAAGTTCTCTTAACTACAGTGACA 2431583
Query 188300 GCTGCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACA 188343
||||| | ||||||||||| || | || ||||||||||||||
Sbjct 2431582 TCTGCATTTTTTTTATACTTCGAGTCTATACGGACATTTATACA 2431539
>seq410
Length=980372
Score = 105 bits (116), Expect = 8e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| ||||| ||||| | |||||| || || ||||| || ||||| ||||| ||||| |
Sbjct 303771 CCTCATCTCTGCTAATAAGTTCGTTGGAGAAGGTGAGGCCAGGCATCAGGCCTCGCTTCT 303712
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| || || || ||||| || ||||| ||||||||||| || ||||| || || |
Sbjct 303711 TGAGCCAGAAGATCGACGCGAAAGAGCCGGAGAAGAAGATTCCCTCCACTGCGGCGAACG 303652
Query 33724 C 33724
|
Sbjct 303651 C 303651
>seq115
Length=3908719
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665
|| ||||| || || | ||| || ||||| |||||||| ||||| || || | || ||
Sbjct 3778542 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3778483
Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724
| ||| ||||| | ||||||||| || || ||||| ||||||||||| |||||||||||
Sbjct 3778482 AACCAGAATATAGCAGCGAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3778424
>seq28
Length=10593136
Score = 89.7 bits (98), Expect = 6e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 188175 TCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATA 188234
|||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct 3155467 TCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCTGCCAGCGTACACATC 3155526
Query 188235 CGAATGG 188241
|| ||||
Sbjct 3155527 CGCATGG 3155533
>seq5245
Length=10255
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 188175 TCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATA 188234
|||||||||||||||||||||||||||| ||||| ||||| || |||||||| |||||
Sbjct 7585 TCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCAGCCAGCGTACACATC 7526
Query 188235 CGAATGG 188241
|| ||||
Sbjct 7525 CGCATGG 7519
>seq193
Length=2547828
Score = 84.2 bits (92), Expect = 3e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232
|||||| |||| |||||||||||||||||| ||||| ||||| ||||||||| ||||||
Sbjct 1233763 GCTCCTACATCAAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCTGCCAGCTTGCACA 1233704
Query 188233 TACGAATGG 188241
| || ||||
Sbjct 1233703 TCCGCATGG 1233695
>seq75
Length=5136827
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232
|||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||
Sbjct 182098 GCTCCTTCATCGAGGACGACTTCAACTATGGCAGCTGTGTGGCCTCTGCCAGCGTACACA 182039
Query 188233 TACG 188236
| ||
Sbjct 182038 TCCG 182035
>seq513
Length=619226
Score = 82.4 bits (90), Expect = 1e-10
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231
||||||| |||| ||||| |||||||||||| ||||| ||||| ||||||||||| |||
Sbjct 213804 TGCTCCTACATCAAGGACAACTTCAACTATGGCAGCTGCGTGGCCTCTGCCAGCGTACAC 213745
Query 188232 ATACGAATGG 188241
|| || ||||
Sbjct 213744 ATCCGCATGG 213735
>seq30
Length=9872594
Score = 82.4 bits (90), Expect = 1e-10
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231
|| |||||||||||||| ||||||||||||| ||||| ||||| ||||||||| | |||
Sbjct 3904942 TGGTCCTCCATCGAGGATGACTTCAACTATGGCAGCTGTGTGGCCTCTGCCAGCATACAC 3904883
Query 188232 ATACGAATGG 188241
|| || ||||
Sbjct 3904882 ATCCGCATGG 3904873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629725851321120
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