Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq190 176 6e-39 seq139 131 2e-25 seq115 98.7 1e-15 seq167 91.5 2e-13 seq74 91.5 2e-13 seq28 89.7 7e-13 seq5245 86.0 8e-12 seq513 86.0 8e-12 seq356 86.0 8e-12 seq193 86.0 8e-12 seq30 86.0 8e-12 seq75 84.2 3e-11 >seq190 Length=2579675 Score = 176 bits (194), Expect = 6e-39 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 9233 CTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAGTA 9292 ||| |||| | |||||||||| | ||||| |||||||| |||||||||||||||||||| Sbjct 2422098 CTTTTTAGCTGCTTCCAAAAGTCGCAACAGGTGCAAGAATAGATTGATGATATCCAAGTA 2422157 Query 9293 GAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGCGT 9352 || |||||| | ||||| ||||| || ||||| || ||| | || || ||||| || || Sbjct 2422158 GAGATTGATGGCAGCTAATACATACTCCTCAGGTGATAGCCTGTGCATCAGTGAATGTGT 2422217 Query 9353 GTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCCAC 9412 ||||||||| |||||||| ||||| | ||| || || | ||||| || |||| ||||| Sbjct 2422218 GTCATAGATGATGAATCCACAGAAAAGAAGCGCTCCTACAGCAGCCACAACCAATTCCAC 2422277 Query 9413 TGTTTCACTTTGCACAAATA 9432 ||| ||||| | | ||||| Sbjct 2422278 TGTCTCACTATAAAAAAATA 2422297 Score = 129 bits (142), Expect = 8e-25 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| ||||||||| |||| |||||||||||||| ||||| | ||||| Sbjct 2425033 CCTGCTCCAAATTTGCTGAAATCTTTCTTAGATTGTAGAGTATACATAGTCAAACCAAGA 2425092 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || |||||||||||||| | |||||||| | || | || |||||||||||||||||| Sbjct 2425093 AATACTGCAGTAGTCAGTACAAAAGCTTGGAGAATAATATACACATCATAGAAAGTAAC 2425151 Score = 104 bits (114), Expect = 3e-17 Identities = 86/103 (83%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || |||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct 2439369 CCATGCGGATGTGCACGCTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 2439428 Query 9907 TGGAGGAGCACGCGT--AGAGGCTCGGCAT-GGCCATGGCGGC 9946 ||||||||| | || || || ||||| | ||||||| |||| Sbjct 2439429 TGGAGGAGCGGGGGTACAGGGGATCGGCGTCGGCCATGTCGGC 2439471 Score = 89.7 bits (98), Expect = 7e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 9744 TGTATAATTTTCCGCATGCAGTCAAAGTATAAAAATACTGCAGTTGTTGCCGTTGTTAAA 9803 ||||||| | |||| || | || ||||||||||| | ||||| ||| | || ||||| Sbjct 2431539 TGTATAAATGTCCGTATAGACTCGAAGTATAAAAAAAATGCAGATGTCACTGTAGTTAAG 2431598 Query 9804 AGAAATTGTAGACAAAGGATACCGTAGACTTTTCTTAGAAATGC 9847 |||| ||| ||| ||||||| |||||||||||||||||| || Sbjct 2431599 AGAACTTGCAGAGAAAGGATGGTGTAGACTTTTCTTAGAAAGGC 2431642 >seq139 Length=3560323 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 1651056 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 1650997 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 1650996 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAA 1650937 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 1650936 CTGTTTCTTATACCATA 1650920 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| |||| ||| |||||||||||||| | || || || || || || || || | || Sbjct 1618135 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 1618076 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 1618075 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1618016 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 1618015 GTTCCACAGTAGTGACCCCACTGTATAAACCTTGGATTACTTTCAT 1617970 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| ||||||||||| || | || | || |||| | Sbjct 1634486 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 1634427 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 1634426 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 1634367 Query 66176 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208 || |||| ||| || || | ||||||| || Sbjct 1634366 AGGCTCCAGGTAAATAGCAAATGCTCCAGGTCG 1634334 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 || || || ||||| || | | || || || ||||| || || || || || || ||| Sbjct 1639122 TAGGTTTCATATGGGCCATGTTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATAA 1639063 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 65540 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 1639062 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 1639003 Query 65541 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 65600 | | |||||||| || ||||| | ||||| || ||||| || ||||| | ||| | Sbjct 1639002 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATAGGGCGATGACGT 1638943 Query 65601 TTATTAGA 65608 ||||| || Sbjct 1638942 TTATTTGA 1638935 >seq115 Length=3908719 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | ||| |||||||| |||||||| ||||| || || | || || Sbjct 3778542 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3778483 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 | ||| ||||| | || ||||| || || ||||||||||||||||| || |||||||| Sbjct 3778482 AACCAGAATATAGCAGCGAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 3778424 >seq167 Length=3014057 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || |||| ||||||||||| ||||| ||||||||||||||||||||||||| | Sbjct 1850918 CCATGCGGTTGTGTACACTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCAA 1850977 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 ||||||||| | |||| || Sbjct 1850978 TGGAGGAGCGGGAGTAGTGG 1850997 >seq74 Length=5139950 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| |||||||| || ||||| |||||||||||||||||||||||| || Sbjct 1882384 CCATGCGGATGTGTACACTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTTGA 1882325 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 || ||||||| | |||| || Sbjct 1882324 TGTAGGAGCAGGGGTAGTGG 1882305 >seq28 Length=10593136 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct 3155533 CCATGCGGATGTGTACGCTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 3155474 Query 9907 TGGAGGA 9913 ||||||| Sbjct 3155473 TGGAGGA 3155467 >seq5245 Length=10255 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| || ||||| || ||||| ||||||||||||||||||||||||||| Sbjct 7519 CCATGCGGATGTGTACGCTGGCTGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 7578 Query 9907 TGGAGGA 9913 ||||||| Sbjct 7579 TGGAGGA 7585 >seq513 Length=619226 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| || |||||||| ||||| |||||||||||||||||| ||||| || Sbjct 213735 CCATGCGGATGTGTACGCTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTTGTCCTTGA 213794 Query 9907 TGGAGGAGCACGCGTAG 9923 || ||||||| | |||| Sbjct 213795 TGTAGGAGCAGGGGTAG 213811 >seq356 Length=1115386 Score = 86.0 bits (94), Expect = 8e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| |||||||| || ||||| |||||||||||||||||||||||| || Sbjct 221566 CCATGCGGATGTGTACACTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTTGA 221625 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 || |||||| | |||| || Sbjct 221626 TGTAGGAGCGGGGGTAGTGG 221645 >seq193 Length=2547828 Score = 86.0 bits (94), Expect = 8e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||||| |||||||| ||||| |||||||||||||||||||||||| || Sbjct 1233695 CCATGCGGATGTGCAAGCTGGCAGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTTGA 1233754 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 || |||||| | |||| || Sbjct 1233755 TGTAGGAGCGGGGGTAGCGG 1233774 >seq30 Length=9872594 Score = 86.0 bits (94), Expect = 8e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || ||||| | |||||||| ||||| ||||||||||||||||||| ||||||| Sbjct 3904873 CCATGCGGATGTGTATGCTGGCAGAGGCCACACAGCTGCCATAGTTGAAGTCATCCTCGA 3904932 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 ||||||| || | |||| || Sbjct 3904933 TGGAGGACCAGGGGTAGCGG 3904952 >seq75 Length=5136827 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 9852 CGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGATGGAG 9911 || ||||| || |||||||| ||||| ||||||||||||||||||||||||||||| || Sbjct 182035 CGGATGTGTACGCTGGCAGAGGCCACACAGCTGCCATAGTTGAAGTCGTCCTCGATGAAG 182094 Query 9912 GAGC 9915 |||| Sbjct 182095 GAGC 182098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658076920677360