Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq5750 118 1e-21 seq1765 113 4e-20 seq356 105 7e-18 seq29 100 3e-16 seq24 98.7 1e-15 seq247 96.9 3e-15 seq374 82.4 8e-11 seq5 82.4 8e-11 >seq5750 Length=9448 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || |||||||| || ||||| || ||| || |||| | | Sbjct 8556 CGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCG 8615 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || || ||||||| || ||||| || || || ||||| |||||| Sbjct 8616 TCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTG 8675 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||| ||||| | ||| | Sbjct 8676 TCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 8735 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||||||||| ||||| ||||| || ||||| Sbjct 8736 GTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 8770 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || |||| || | ||| | || |||||||| || ||||| || ||| | Sbjct 7860 CCCCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 7919 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| | |||||| ||||| || || || ||||||| || ||||| || || || Sbjct 7920 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 7979 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| |||||||| ||| || || | | || | ||||| ||||||| ||| Sbjct 7980 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 8039 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||||||||| || || ||||| || ||||| Sbjct 8040 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 8086 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || |||||||| || ||||| || ||| || |||| | | Sbjct 8328 CGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCG 8387 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || || ||||||| || ||||| || || || ||||| |||||| Sbjct 8388 TCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTG 8447 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||| ||||| | ||| | Sbjct 8448 TCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 8507 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||||||||| || || ||||| || ||||| Sbjct 8508 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 8542 >seq1765 Length=41513 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || |||||||| || ||||| || ||| || |||| | | Sbjct 9398 CGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCG 9457 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || || ||||||| || ||||| || || || ||||| |||||| Sbjct 9458 TCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTG 9517 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||| ||||| | ||| | Sbjct 9518 TCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 9577 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||||||||| || || ||||| || ||||| Sbjct 9578 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 9612 >seq356 Length=1115386 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || |||||||| || ||||| ||||| | |||| Sbjct 17721 ACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCC 17780 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| || |||||| |||| || | ||||| || || || |||||||| || Sbjct 17781 ATCTTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTT 17840 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| || ||| | | || | ||||| ||||||||||||| | ||| | Sbjct 17841 ATCCTGGATCTTGGCTTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 17900 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||||| || || ||||| |||||||| Sbjct 17901 GGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 17936 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| ||||| | |||| |||||| ||||| || || Sbjct 17512 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCTTCCAGCTGCTTGCCT 17571 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || | ||||| || || || |||||||| || || ||| || || Sbjct 17572 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 17631 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | || || ||||||||| ||| | ||| | ||||||||||||| || Sbjct 17632 ACATTCTCAATGGTATCACTGGGCTCCAACTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 17691 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 17692 TTCACGAAGATCTGCATA 17709 >seq29 Length=10643064 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| ||||| ||||||||||| || || || |||| | |||||| || || Sbjct 9522398 TGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGCCCGTCTTCCAGTTGC 9522457 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| ||||||| | ||||||||| ||||| || ||||| || || ||| || Sbjct 9522458 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 9522517 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | ||| | || || | ||| || ||||| | || | ||||| || || Sbjct 9522518 GCCTTCACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTG 9522577 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 9522578 AGGGTTTTCACGAAAATCTGCAT 9522600 >seq24 Length=11218282 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || |||| || | ||| | || ||| | || || ||||| || | | | Sbjct 4792859 CCACCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACGCCTTCTGGATGTTGTAGTAGGAC 4792800 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| | ||||| ||||| ||||||| ||||||| |||||||| || || || Sbjct 4792799 AGGGTGCGCCCATCTTCCAGCTGCTTACCAGTGAAGATCAGCCGTTGCTGGTCAGGGGGG 4792740 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| |||||||| ||| || || | | | | ||||| ||||||| ||| Sbjct 4792739 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTTGATGGTGTCACTGGGCTCGACC 4792680 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||||||||| || || | ||| || ||||| Sbjct 4792679 TCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCATGAAGATCTGCAT 4792633 >seq247 Length=1816170 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/218 (71%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || ||||| | || |||||||| ||||| || || || || | || ||| Sbjct 1422558 ACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGACA--GAGCGCGA 1422615 Query 139609 G--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 || || |||||||| || ||| | |||||||| ||||| || || || |||| || Sbjct 1422616 CCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGGTGCCCTCC 1422675 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| |||||| ||| | | || | ||||| ||||||||||||||| ||| Sbjct 1422676 TTGTCTC-GATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTG 1422734 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | |||||||| |||| | || || || || ||||| Sbjct 1422735 ATGGTCTTGCCAGTCAGGCTCTTCACAAAGATCTGCAT 1422772 >seq374 Length=1022520 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| ||||| ||||||||||| || | || |||| | |||||| || || Sbjct 479171 TGAAGCGTGGACTCCTTTTGAATGTTGTAGTAAGACAAAGTGCACCCGTCTTCCAGTTGC 479230 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| ||||||| | ||||||||| ||||| || ||||| || || | | || Sbjct 479231 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGGTCTTA 479290 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | ||| | || || | ||| || ||||| | || ||||| || || Sbjct 479291 GCCTTGACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGAGTGGTGGTCTTCCCCGTG 479350 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| | ||| || ||||| Sbjct 479351 AGGGTTTTCATGAAAATCTGCAT 479373 >seq5 Length=22519077 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | || ||||| ||||||||||| ||||| || || | | Sbjct 15114119 CGCAACACAAGATGGACAGTGGACTCCTTTTGAATGTTGTAATCAGACAGAGTACATCTG 15114060 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| || || || ||||| ||||||| | ||||||||| ||||| || ||||| || Sbjct 15114059 TCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 15114000 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || |||| | ||| | ||| || | ||| | ||||| | || | Sbjct 15113999 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTCCAACCTCGAGAGTGATG 15113940 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || | | ||||| || || || ||||| Sbjct 15113939 GTCTTCCCCATGAGGGTTTTCACAAAAATCTGCAT 15113905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495991735876800