Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq514 87.8 3e-12 seq410 84.2 3e-11 >seq514 Length=764159 Score = 87.8 bits (96), Expect = 3e-12 Identities = 112/155 (72%), Gaps = 12/155 (8%) Strand=Plus/Plus Query 127393 ACCTTGTACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACACGTTG--------CG-- 127442 ||||| || ||||| ||| ||||||| |||||||| || | || || Sbjct 629068 ACCTTATAGGGCATAGATTCAAAAAAGATGGATGTAGCAGAGATTTTCTTCTTGTCCGTC 629127 Query 127443 --GAATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGC 127500 ||| ||||| ||||||||||||||||||||||| || || |||||||| | ||||| Sbjct 629128 ATGAACCCGTGGGTCAGGTGGCCTCCGTCGGGCAGGTCCAGGCCCATGATGCGCCCGTGG 629187 Query 127501 GGTTTAACGATTCCAGTGTACACGGCAAAGTTGGC 127535 |||| || | | |||||||| || |||||||| Sbjct 629188 GGTTCCACCAGGGCGGTGTACACTGCGAAGTTGGC 629222 >seq410 Length=980372 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 ||||||| |||||||| || ||||| |||||||| || || ||| ||| | ||||| | Sbjct 303646 TGGTGGCGTTCGCCGCAGTGGAGGGAATCTTCTTCTCCGGCTCTTTCGCGTCGATCTTCT 303705 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 ||||||||||||| || || ||||| || || || Sbjct 303706 GGCTCAAGAAGCGAGGCCTGATGCCTGGCCTCAC 303739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740951246201040