Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq146 134 1e-26 seq9012 107 2e-18 seq93 96.9 3e-15 >seq146 Length=3351112 Score = 134 bits (148), Expect = 1e-26 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| ||||||||| |||||||||||||| Sbjct 1997236 GGTTACCTGGGTTGCCAAGCCTTGTCCGAGATGATCCAGTTTTACCTGGAAGAGGTGATG 1997177 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || | || || ||||||||||| |||| ||| | ||||||||| || ||| Sbjct 1997176 CCCCAGGCCGAGAGCCAGGGCCCGGACATCAAGGAGCCCGTGAGCTCGCTGGGGGAGAAG 1997117 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || |||||| | || | ||||| ||||| Sbjct 1997116 CTGAAGACGCTGAGGCTGCAGCTGCGGCGCTG 1997085 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/103 (80%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151 ||| ||||| |||| || ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 1995058 GCTCCAGGAGAGAGGGGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 1994999 Query 129152 AGAATCATACATGACTACTAA-ATAATAAAATGTAGTATATAA 129193 ||| | |||||||| | || || | |||||| | |||||| Sbjct 1994998 AGAGGCCTACATGACAATGAAGATGAAAAAATGAAACATATAA 1994956 >seq9012 Length=6576 Score = 107 bits (118), Expect = 2e-18 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374 || ||||| || || ||||| || || | ||| || || ||| | ||||| | || Sbjct 4795 ATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATTTTTA-CTTCAAAATTTTCTTTG 4853 Query 5375 CCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCG 5434 || || ||||| || || || || | ||| |||| || ||||| || ||||| ||||| Sbjct 4854 CCAAAATTAAATAGTACAACACCAAGATTTCCTCTATAATCTTCATCTATAACACCAGCT 4913 Query 5435 CCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAA 5494 || ||||| ||||||||||| | || | || ||||||||| ||| | ||| ||||| Sbjct 4914 CCTACGTCTATAAAGTGTTTTGCAGCCAAGCTGGAACGTGGAGCTCCTCTTCCATAGCAC 4973 Query 5495 CCAGGTGGGAGCTTTATCAGAAGGTCAGT 5523 |||| || || |||| ||| |||||| Sbjct 4974 CCAGAAGGAAGAGCTATCTGAATGTCAGT 5002 >seq93 Length=4592439 Score = 96.9 bits (106), Expect = 3e-15 Identities = 193/285 (68%), Gaps = 1/285 (0%) Strand=Plus/Plus Query 5239 TCCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTG 5298 ||| |||||||| || || ||| | || ||||| ||||| | ||| || | Sbjct 2488804 TCCAGTAGAACCAAAACCCCCTGAGCCCCTTTCAGTGTCATCCAAAACTTGAACTTCCTC 2488863 Query 5299 AACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAAC 5358 | | |||| | | || ||||| || || ||||| || || | ||| || || ||| | Sbjct 2488864 TATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATTTTTA-C 2488922 Query 5359 CTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTC 5418 ||||| | || || || ||||| | || || || | ||| |||| || ||||| Sbjct 2488923 TTCAAAATTTTCTTTGCCAAAATTAAATAATACAACACCAAGATTTCCTCTATAATCTTC 2488982 Query 5419 GTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGC 5478 || ||||| ||||| || || || ||||||||||| | || | || ||||||||| || Sbjct 2488983 ATCTATAACACCAGCTCCTACATCTATAAAGTGTTTTGCAGCCAAGCTGGAACGTGGAGC 2489042 Query 5479 TATGCGTCCGTAGCAACCAGGTGGGAGCTTTATCAGAAGGTCAGT 5523 | | ||| ||||| |||| || || | || ||| |||||| Sbjct 2489043 TCCTCTTCCATAGCACCCAGAAGGAAGAGCTGTCTGAATGTCAGT 2489087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447685173960480