Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq146 109 5e-19 >seq146 Length=3351112 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 1997227 GGTTGCCAAGCCTTGTCCGAGATGATCCAGTTTTACCTGGAAGAGGTGATGCCCCAGGCC 1997168 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || | || || || ||||| || || | ||| | || ||||| || ||||||||||| Sbjct 1997167 GAGAGCCAGGGCCCGGACATCAAGGAGCCCGTGAGCTCGCTGGGGGAGAAGCTGAAGACG 1997108 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 |||| || | ||||| ||||| Sbjct 1997107 CTGAGGCTGCAGCTGCGGCGCTG 1997085 Score = 93.3 bits (102), Expect = 4e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| ||||| ||||| || ||||| |||||||||||||||||||| ||||||||||||| Sbjct 1995059 AGCTCCAGGAGAGAGGGGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 1995000 Query 127439 TCGAGACTTACATG 127452 | ||| | |||||| Sbjct 1994999 TAGAGGCCTACATG 1994986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429993318029648