Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq402 104 2e-17 >seq402 Length=911058 Score = 104 bits (114), Expect = 2e-17 Identities = 121/162 (75%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || ||||| | || || |||||||| ||||| || ||||||||||||||| ||||| Sbjct 128709 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 128650 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | |||||||| | | ||||||||||| ||||| || || ||||| ||| Sbjct 128649 ACACCTAGCCCCATGT-CGGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 128591 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 |||||| ||||| || | || | ||| ||||| || || || Sbjct 128590 CACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCAT 128549 Score = 87.8 bits (96), Expect = 1e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| ||||| || |||| ||||||||| || || || || || |||| || Sbjct 126301 CATATCTTTGTAGTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATC 126242 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 ||| |||| ||| || ||| || |||| ||||| | ||| ||||||||||| Sbjct 126241 TCCTTCTTTTCTGCTGGAGAATCCCAGGTTGTCCAGGAAGTCACGGGACCCATTGGCGTC 126182 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||| | || ||||| || || ||||| | |||||||| || Sbjct 126181 CCAGATTCTCACTCCCTTGGACGACAGTTCTTTAGCATTTGTGGATCC 126134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340089289193742